RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 AK3Q9UIJ7 227 aa0.65□□□□□ -2.31
PSMA4-221ENST00000560842 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 IGHV1-69-2A0A0G2JMI3 117 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 IL3P08700 152 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 KRT7P08729 469 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 TNFAIP8L2Q6P589 184 aaPredicted RBP0.64□□□□□ -2.31
PSMA4-221ENST00000560842 FUNDC1Q8IVP5 155 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 GID4Q8IVV7 300 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 TMEM161BQ8NDZ6 487 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 DNAJB3Q8WWF6 145 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 DCUN1D5Q9BTE7 237 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 CFAP45Q9UL16 551 aa0.64□□□□□ -2.31
PSMA4-221ENST00000560842 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
PSMA4-221ENST00000560842 LAMB4A4D0S4 1761 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 DISC1C4P0D8 188 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 F5H768 121 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 NPPAP01160 153 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 OCMP0CE72 109 aaPredicted RBP0.63□□□□□ -2.31
PSMA4-221ENST00000560842 UGT2B7P16662 529 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 CDC34P49427 236 aaPredicted RBP0.63□□□□□ -2.31
PSMA4-221ENST00000560842 FXYD2P54710 66 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 OR1M1Q8NGA1 313 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 KCTD7Q96MP8 289 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 REG4Q9BYZ8 158 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 IMP3Q9NV31 184 aaKnown RBP0.63□□□□□ -2.31
PSMA4-221ENST00000560842 POLR1DQ9Y2S0 133 aa0.63□□□□□ -2.31
PSMA4-221ENST00000560842 MICAL3Q7RTP6 2002 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 OR4C45A6NMZ5 311 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 SDCBPO00560 298 aaPredicted RBP0.62□□□□□ -2.31
PSMA4-221ENST00000560842 C1QAP02745 245 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 NDUFA5Q16718 116 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 NDEL1Q9GZM8 345 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 DKKL1Q9UK85 242 aa0.62□□□□□ -2.31
PSMA4-221ENST00000560842 EIF4G1Q04637 1599 aaKnown RBP0.62□□□□□ -2.31
PSMA4-221ENST00000560842 POLEQ07864 2286 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 MAST2Q6P0Q8 1798 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 IRGMA1A4Y4 181 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 GEMIN2O14893 280 aaKnown RBP0.61□□□□□ -2.31
PSMA4-221ENST00000560842 CALUO43852 315 aaPredicted RBP0.61□□□□□ -2.31
PSMA4-221ENST00000560842 CLPSP04118 112 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 SULT1A3P0DMM9 295 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 SULT1A4P0DMN0 295 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 FGF6P10767 208 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 HAAOP46952 286 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 CSN1S1P47710 185 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 RAB13P51153 203 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF345Q14585 488 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 TBC1D19Q8N5T2 526 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 TMEM251Q8N6I4 163 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF676Q8N7Q3 588 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF565Q8N9K5 539 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 ANKRD7Q92527 254 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 YIPF3Q9GZM5 350 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 CXorf21Q9HAI6 301 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 BAIAP2Q9UQB8 552 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 TECTAO75443 2155 aa0.61□□□□□ -2.31
PSMA4-221ENST00000560842 TNRC6BQ9UPQ9 1833 aaKnown RBP0.61□□□□□ -2.31
PSMA4-221ENST00000560842 IGHV3-7P01780 117 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 REG1AP05451 166 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 C8orf88P0DMB2 117 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 NFYAP23511 347 aaPredicted RBP0.6□□□□□ -2.31
PSMA4-221ENST00000560842 HLA-DMBP28068 263 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 REG1BP48304 166 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 UBE2G2P60604 165 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 FAM19A2Q8N3H0 131 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 C12orf29Q8N999 325 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 ROPN1LQ96C74 230 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 C7orf50Q9BRJ6 194 aaKnown RBP0.6□□□□□ -2.31
PSMA4-221ENST00000560842 OR51I2Q9H344 312 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 PLEKHJ1Q9NW61 149 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 PXMP4Q9Y6I8 212 aa0.6□□□□□ -2.31
PSMA4-221ENST00000560842 DIDO1Q9BTC0 2240 aaKnown RBP0.6□□□□□ -2.31
PSMA4-221ENST00000560842 IGKV1-9A0A0C4DH69 117 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 I3L521 148 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 SLC22A1O15245 554 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 COCHO43405 550 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 SRP19P09132 144 aaKnown RBP0.59□□□□□ -2.31
PSMA4-221ENST00000560842 METTL15P1P0C7V9 234 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF80P51504 273 aaPredicted RBP0.59□□□□□ -2.31
PSMA4-221ENST00000560842 OR4D2P58180 307 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 PPP1R1AQ13522 171 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 TEX36Q5VZQ5 186 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 CST9Q5W186 159 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 PLEKHG7Q6ZR37 379 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 ZNF550Q7Z398 422 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 SNURFQ9Y675 71 aa0.59□□□□□ -2.31
PSMA4-221ENST00000560842 PMP2P02689 132 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 S100A7P31151 101 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 CD151P48509 253 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 RUNX1Q01196 453 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 MED21Q13503 144 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 ZNF846Q147U1 533 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 TRABDQ9H4I3 376 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 FUT9Q9Y231 359 aa0.58□□□□□ -2.32
PSMA4-221ENST00000560842 ABCC11Q96J66 1382 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 C19orf84I3L1E1 186 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 M0QX08 132 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 ITGB1BP1O14713 200 aa0.57□□□□□ -2.32
PSMA4-221ENST00000560842 NOS1APO75052 506 aaPredicted RBP0.57□□□□□ -2.32
PSMA4-221ENST00000560842 FAM228BP0C875 321 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms