RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RPL27P61353 136 aaKnown RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 FMODQ06828 376 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 SRSF1Q07955 248 aaKnown RBP eCLIP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 SMAGPQ0VAQ4 97 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 STUMQ69YW2 141 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 OR10V1Q8NGI7 309 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 SGK494Q96LW2 274 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 MOB1AQ9H8S9 216 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 RANBP2P49792 3224 aaKnown RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 C4orf51C9J302 202 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 F2Z2F3 143 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 M0R1X1 148 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 ERI3O43414 337 aaKnown RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 SRSF10O75494 262 aaKnown RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 CST7O76096 145 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 RENP00797 406 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 BGLAPP02818 100 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 AMTP48728 403 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 ERVK11-1P61568 191 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 KLRB1Q12918 225 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 C3AR1Q16581 482 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 TCTEX1D4Q5JR98 221 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 OR2M3Q8NG83 312 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 MRPL30Q8TCC3 161 aaKnown RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 RTN4IP1Q8WWV3 396 aaPredicted RBP5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 ABHD14BQ96IU4 210 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 WASHC3Q9Y3C0 194 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 OR2W1Q9Y3N9 320 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 R4GMQ9 66 aa5.56□□□□□ -1.52
TSPAN3-209ENST00000560715 FER1L5A0AVI2 2057 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 S1PR2O95136 353 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 GTF2H5Q6ZYL4 71 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 OR8I2Q8N0Y5 310 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 LRRC25Q8N386 305 aaPredicted RBP5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SMRP1Q8NCR6 262 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 CYYR1Q96J86 154 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SIGLEC12Q96PQ1 595 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 GTSF1LQ9H1H1 148 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SERTAD4Q9NUC0 356 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SLC17A4Q9Y2C5 497 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 HEATR5BQ9P2D3 2071 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SSSCA1O60232 199 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 IFNA5P01569 189 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 PSMB3P49720 205 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 EMDP50402 254 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF83P51522 516 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF133P52736 654 aaPredicted RBP5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF154Q13106 437 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZIC1Q15915 447 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 GLIPR1L1Q6UWM5 242 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 C12orf54Q6X4T0 127 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 MARCH3Q86UD3 253 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 OR10P1Q8NGE3 313 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 SLC25A40Q8TBP6 338 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 C8orf44Q96CB5 159 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 KCNS1Q96KK3 526 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF488Q96MN9 340 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 LRRC61Q9BV99 259 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 TMEM59Q9BXS4 323 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 VSIRQ9H7M9 311 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF286AQ9HBT8 521 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 RARRES3Q9UL19 164 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 POLR1DQ9Y2S0 133 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 COL4A2P08572 1712 aa5.55□□□□□ -1.52
TSPAN3-209ENST00000560715 MUC21A0A0G2JKD1 596 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 MUC21A0A140T8X8 626 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF878C9JN71 531 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 H0YJW9 148 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 NUDT3O95989 172 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 CGAP01215 116 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF728P0DKX0 622 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 IGLL1P15814 213 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PGCP20142 388 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 CBLN1P23435 193 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 OPRM1P35372 400 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 ABCA11PQ4W5N1 156 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 MUC21Q5SSG8 566 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 ADAMTSL5Q6ZMM2 481 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 ATOH7Q8N100 152 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 OR2Z1Q8NG97 314 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 SGMS2Q8NHU3 365 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 C1orf147Q96MC9 270 aaPredicted RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PSMG3Q9BT73 122 aaPredicted RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PECRQ9BY49 303 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 UBE2ZQ9H832 354 aaPredicted RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PPP1R3CQ9UQK1 317 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 TRAV9-1A0A075B6T8 112 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 LOC102725191A0A1B0GVB3 256 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 A0A1W2PS18 150 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 FRG2CA6NGY1 282 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 H0Y980 276 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 MDH2P40926 338 aaKnown RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 RHOBP62745 196 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PRDX1Q06830 199 aaKnown RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 MLF2Q15773 248 aaPredicted RBP5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 OTPQ5XKR4 325 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 OR5A2Q8NGI9 324 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 OR5P3Q8WZ94 311 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms