RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 RELTQ969Z4 430 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 GALMQ96C23 342 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 SLC35E1Q96K37 410 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 PRRG4Q9BZD6 226 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 DEFB127Q9H1M4 99 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 SLC25A22Q9H936 323 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 TUBG2Q9NRH3 451 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM167BQ9NRX6 74 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 SLC45A2Q9UMX9 530 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 PKDREJQ9NTG1 2253 aa7.17□□□□□ -1.26
CCDC33-209ENST00000560565 DCHS2Q6V1P9 2916 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 IGHV3-15A0A0B4J1V0 119 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.16□□□□□ -1.26
CCDC33-209ENST00000560565 TMEM30CPA0ZSE6 113 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 AHRRA9YTQ3 701 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 SIRPB1O00241 398 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 CCL21O00585 134 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 CDIPTO14735 213 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 TNFSF12O43508 249 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 IGKV1-5P01602 117 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 OR4A8P0C604 315 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 GZMHP20718 246 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 BMP5P22003 454 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 GCH1P30793 250 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 TIMP3P35625 211 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 CA7P43166 264 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 GPM6AP51674 278 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 RHOBP62745 196 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 GABRA6Q16445 453 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 CST9LP1Q5W188 147 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF497Q6ZNH5 498 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 MCEMP1Q8IX19 187 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 C11orf52Q96A22 123 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 BORCS7Q96B45 105 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
CCDC33-209ENST00000560565 LPAR2Q9HBW0 351 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 MBNL3Q9NUK0 354 aaKnown RBP7.16□□□□□ -1.26
CCDC33-209ENST00000560565 BET1LQ9NYM9 111 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 SH3BGRL2Q9UJC5 107 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 WDR83OSQ9Y284 106 aa7.16□□□□□ -1.26
CCDC33-209ENST00000560565 TRGV10A0A0A0MS01 117 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 IGKV1-6A0A0C4DH72 117 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 A1L4Q6 167 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 C5orf63A6NC05 138 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 OOEPA6NGQ2 149 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 PRRG2O14669 202 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ZG16O60844 167 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF253O75346 499 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 RBMXL2O75526 392 aaKnown RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 IL6RP08887 468 aaPredicted RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF16P17020 682 aaPredicted RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 CHRNA7P36544 502 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ERVK-16P61578 105 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 SRYQ05066 204 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 C3AR1Q16581 482 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 AARDQ4LEZ3 155 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 LEMD1Q68G75 181 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 C1orf174Q8IYL3 243 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 IL1F10Q8WWZ1 152 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 TXN2Q99757 166 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 VSIRQ9H7M9 311 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 MSL2Q9HCI7 577 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 SLC35D1Q9NTN3 355 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 MRPL27Q9P0M9 148 aaKnown RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 SPRR3Q9UBC9 169 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 SLC25A10Q9UBX3 287 aaPredicted RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 ZNF835Q9Y2P0 537 aa7.15□□□□□ -1.26
CCDC33-209ENST00000560565 MRPS16Q9Y3D3 137 aaKnown RBP7.15□□□□□ -1.26
CCDC33-209ENST00000560565 APCP25054 2843 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 FCN1O00602 326 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCDC33-209ENST00000560565 SIAH2O43255 324 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ZNHIT1O43257 154 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 WDR1O75083 606 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 SS18L1O75177 396 aaPredicted RBP7.14□□□□□ -1.27
CCDC33-209ENST00000560565 CD55P08174 381 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ADH4P08319 380 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 STAG3L3P0CL85 134 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 MDKP21741 143 aaPredicted RBP7.14□□□□□ -1.27
CCDC33-209ENST00000560565 GRNP28799 593 aaKnown RBP7.14□□□□□ -1.27
CCDC33-209ENST00000560565 PCP4P48539 62 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 RAB7AP51149 207 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 TAS2R45P59539 299 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ARL16Q0P5N6 197 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 OR5I1Q13606 314 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ZNF146Q15072 292 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 TIGITQ495A1 244 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ARSJQ5FYB0 599 aaPredicted RBP7.14□□□□□ -1.27
CCDC33-209ENST00000560565 TPTE2P1Q5T6R2 138 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 SLC35E4Q6ICL7 350 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ACSM6Q6P461 480 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
CCDC33-209ENST00000560565 ZNF738Q8NE65 137 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms