RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 AKR1E2Q96JD6 320 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 ADAT1Q9BUB4 502 aaKnown RBP3.54□□□□□ -1.84
TMOD3-207ENST00000560549 RTL8AQ9BWD3 113 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 C11orf1Q9H5F2 150 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 HES4Q9HCC6 221 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 SLC2A9Q9NRM0 540 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 TMEM100Q9NV29 134 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 OR1A1Q9P1Q5 309 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 KIF25Q9UIL4 384 aa3.54□□□□□ -1.84
TMOD3-207ENST00000560549 ABCA2Q9BZC7 2435 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 BSNQ9UPA5 3926 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PPIAL4EA0A075B759 164 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 C3orf85A0A1B0GTC6 90 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 A0A1W2PPE3 182 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 KANTRA0A1W2PQU2 76 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 K7EPK0 472 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 M0R1B8 84 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 SIGLEC5O15389 551 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PHF1O43189 567 aaPredicted RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 BUB3O43684 328 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PGLYRP1O75594 196 aaPredicted RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 SNAPC5O75971 98 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 SVILO95425 2214 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 HAND1O96004 215 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 GLAP06280 429 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 FAM157CP0CG43 387 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PPIAL4FP0DN26 164 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 GLP1RP43220 463 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 TDGF1P3P51864 188 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 S100A10P60903 97 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 RAB14P61106 215 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 HERV-K104P61576 105 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 RND3P61587 244 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 UBA52P62987 128 aaKnown RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 HLA-DRB3P79483 266 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 CYCSP99999 105 aaKnown RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 ZNF146Q15072 292 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 P2RY6Q15077 328 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 ABCA11PQ4W5N1 156 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PAN3Q58A45 887 aaKnown RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 FREM1Q5H8C1 2179 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 ZNF497Q6ZNH5 498 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 LINC00596Q86U02 117 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 DOLPP1Q86YN1 238 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 GAPTQ8N292 157 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 STPG2Q8N412 459 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 FAM71E2Q8N5Q1 922 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 CD177Q8N6Q3 437 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 DMBX1Q8NFW5 382 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 OR5T2Q8NGG2 359 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 OR1L4Q8NGR5 311 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 OR1L1Q8NH94 360 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 FAM57AQ8TBR7 257 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 NEK7Q8TDX7 302 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 RBPMSQ93062 196 aaKnown RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 C17orf77Q96MU5 243 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 LINC00052Q96N35 136 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 AQP10Q96PS8 301 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 DUX5Q96PT3 197 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 UHRF2Q96PU4 802 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 DCTN5Q9BTE1 182 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 CABLES2Q9BTV7 478 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 ZNF471Q9BX82 626 aaPredicted RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 ZNF407Q9C0G0 2248 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 TLNRD1Q9H1K6 362 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 CXXC4Q9H2H0 198 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 MED9Q9NWA0 146 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 C1orf123Q9NWV4 160 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 SDHAF2Q9NX18 166 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 CSDC2Q9Y534 153 aaKnown RBP3.53□□□□□ -1.84
TMOD3-207ENST00000560549 PPIAL4AQ9Y536 164 aa3.53□□□□□ -1.84
TMOD3-207ENST00000560549 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 A0A0G2JRQ6 117 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 MEX3AA1L020 520 aaKnown RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM210A6NLX4 147 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 A8MXK9 166 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 I3L521 148 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 GPR31O00270 319 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SH2D1BO14796 132 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 FGF16O43320 207 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TNFSF12O43508 249 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 DEDDO75618 318 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 NXPH2O95156 264 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM50AO95807 157 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 IGKV1-39P01597 117 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 IGKV1D-39P04432 117 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 STAG3L2P0CL84 134 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TIMP3P35625 211 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 RAB11AP62491 216 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 GNMTQ14749 295 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 HMGN3Q15651 99 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SPIN3Q5JUX0 258 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 FAM201AQ5SY85 155 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 UTF1Q5T230 341 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 RPL7L1Q6DKI1 246 aaKnown RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 WDR82Q6UXN9 313 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF562Q6V9R5 426 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 ACP7Q6ZNF0 438 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TGIF2LXQ8IUE1 241 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms