RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 DEFA4P12838 97 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 RPL27AP46776 148 aaKnown RBP13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 UBE2UQ5VVX9 321 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 TPRA1Q86W33 373 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 CXorf58Q96LI9 332 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 OR51E2Q9H255 320 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
TSPAN3-208ENST00000560514 LINC00473A8K010 186 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 IGLL5B9A064 214 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 TSPAN4O14817 238 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 SCGNO76038 276 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 SLC22A5O76082 557 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 FCGR2BP31994 310 aaPredicted RBP13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 C19orf35Q6ZS72 473 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
TSPAN3-208ENST00000560514 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 NOTOA8MTQ0 251 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 TEX22C9J3V5 150 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 LCE2DQ5TA82 110 aaPredicted RBP13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 FCGR1BQ92637 280 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 ATG5Q9H1Y0 275 aa13.14□□□□□ -0.31
TSPAN3-208ENST00000560514 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 MPTX1A8MV57 137 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 PSMB6P28072 239 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 GPR183P32249 361 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 SPARTQ8N0X7 666 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-208ENST00000560514 A0A075B6Q4 140 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 KBTBD11O94819 623 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 CRYGCP07315 174 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 MAS1LP35410 378 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 OR2B11Q5JQS5 317 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 KCTD9Q7L273 389 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 Q9H521 79 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
TSPAN3-208ENST00000560514 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 C11orf94C9JXX5 98 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 HLA-DQB1P01920 261 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 AREGP15514 252 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 MFAP2P55001 183 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 SCAND1P57086 179 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 VKORC1L1Q8N0U8 176 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
TSPAN3-208ENST00000560514 DNAH6Q9C0G6 4158 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 IGKV1D-8A0A087WSZ0 117 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 CD36P16671 472 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 ZNF645Q8N7E2 425 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 THYN1Q9P016 225 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 APLNQ9ULZ1 77 aa13.1□□□□□ -0.31
TSPAN3-208ENST00000560514 E7EUB6 86 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 J3QRK9 145 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 TMEM127O75204 238 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 S1PR2O95136 353 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 REG1AP05451 166 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 TMEM167AQ8TBQ9 72 aa13.09□□□□□ -0.31
TSPAN3-208ENST00000560514 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 A0A1B0GVY2 172 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 PRSS29PA6NIE9 313 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 DEFB4AO15263 64 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 RPA2P15927 270 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 PSMB9P28065 219 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 ADMP35318 185 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 ZNF502Q8TBZ5 544 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 TMEM190Q8WZ59 177 aa13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 HSD17B10Q99714 261 aaKnown RBP13.08□□□□□ -0.32
TSPAN3-208ENST00000560514 C20orf24Q9BUV8 137 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms