RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 UCHL1P09936 223 aa12.12□□□□□ -0.47
HERC1-207ENST00000560316 AHSA2Q719I0 299 aa12.12□□□□□ -0.47
HERC1-207ENST00000560316 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
HERC1-207ENST00000560316 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
HERC1-207ENST00000560316 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
HERC1-207ENST00000560316 A0A075B6Q4 140 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 OR2T8A6NH00 312 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 M0R2N4 97 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 DENRO43583 198 aaKnown RBP12.11□□□□□ -0.47
HERC1-207ENST00000560316 GNB3P16520 340 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 OR4S2Q8NH73 311 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
HERC1-207ENST00000560316 RBMX2Q9Y388 322 aaKnown RBP12.11□□□□□ -0.47
HERC1-207ENST00000560316 IGHV4-4A0A075B6R2 117 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
HERC1-207ENST00000560316 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 PTBP1P26599 531 aaKnown RBP eCLIP12.1□□□□□ -0.474e-8■■■■■ 27.3
HERC1-207ENST00000560316 TFPI2P48307 235 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 BRWD1-AS2P59051 145 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
HERC1-207ENST00000560316 LAIR2Q6ISS4 152 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 TCTEX1D2Q8WW35 142 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 FAM3DQ96BQ1 224 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
HERC1-207ENST00000560316 HSPG2P98160 4391 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 TMEM272A0A1B0GTI8 110 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 CD36P16671 472 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 HLA-GP17693 338 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 NFYAP23511 347 aaPredicted RBP12.09□□□□□ -0.47
HERC1-207ENST00000560316 ADMP35318 185 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 PQLC1Q8N2U9 271 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 SPATA2Q9UM82 520 aa12.09□□□□□ -0.47
HERC1-207ENST00000560316 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 OR2B8PP59922 312 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 TMEM187Q14656 261 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 Q6ZTC4 211 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 Q8NAQ8 132 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 GPHA2Q96T91 129 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 RNF2Q99496 336 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 CHRDL1Q9BU40 450 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 S100A14Q9HCY8 104 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 RAB22AQ9UL26 194 aa12.08□□□□□ -0.48
HERC1-207ENST00000560316 IGHV3-21A0A0B4J1V1 117 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 NDUFA4O00483 81 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 MFNGO00587 321 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 EIF4EBP1Q13541 118 aaPredicted RBP12.07□□□□□ -0.48
HERC1-207ENST00000560316 IRF3Q14653 427 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 HRH4Q9H3N8 390 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 THYN1Q9P016 225 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 ETV7Q9Y603 341 aa12.07□□□□□ -0.48
HERC1-207ENST00000560316 TRAV10A0A0B4J240 114 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 K7EMT4 169 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 HRASP01112 189 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
HERC1-207ENST00000560316 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 TALDO1P37837 337 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
HERC1-207ENST00000560316 HES5Q5TA89 166 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 TMEM91Q6ZNR0 172 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 NR2C2APQ86WQ0 139 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 MFSD4AQ8N468 514 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 GBGT1Q8N5D6 347 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 POM121L12Q8N7R1 296 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 BPIFB6Q8NFQ5 453 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 VN1R17PQ8TDU5 208 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 BSCL2Q96G97 398 aaPredicted RBP12.06□□□□□ -0.48
HERC1-207ENST00000560316 HSD17B10Q99714 261 aaKnown RBP12.06□□□□□ -0.48
HERC1-207ENST00000560316 HRASLSQ9HDD0 168 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 TAS2R8Q9NYW2 309 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
HERC1-207ENST00000560316 ELF5Q9UKW6 265 aaPredicted RBP12.06□□□□□ -0.48
HERC1-207ENST00000560316 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 TRAV3A0A0B4J244 114 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 IGHV4-28A0A0C4DH34 117 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 HIST1H1DP16402 221 aaKnown RBP12.05□□□□□ -0.48
HERC1-207ENST00000560316 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
HERC1-207ENST00000560316 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 LIPKQ5VXJ0 399 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 Q6ZS49 121 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 CENPOQ9BU64 300 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 MND1Q9BWT6 205 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 FKBP14Q9NWM8 211 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
HERC1-207ENST00000560316 CHEK1O14757 476 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 MRPS14O60783 128 aaKnown RBP12.04□□□□□ -0.48
HERC1-207ENST00000560316 SLC22A5O76082 557 aa12.04□□□□□ -0.48
HERC1-207ENST00000560316 GNAO1P09471 354 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms