RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ANXA3P12429 323 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 CD1BP29016 333 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 S100GP29377 79 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 BCAP31P51572 246 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 AKR1C2P52895 323 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RAG2P55895 527 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RRAS2P62070 204 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 SSBP2P81877 361 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 HABP2Q14520 560 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 PSG5Q15238 335 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RTL8BQ17RB0 113 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 LRRC75BQ2VPJ9 315 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 TMEM95Q3KNT9 176 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 LRRC37A5PQ49AS3 106 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 Q5BKY6 102 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 NMSQ5H8A3 153 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 OR4A47Q6IF82 309 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 C9orf139Q6ZV77 190 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FOXRED2Q8IWF2 684 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 PUSL1Q8N0Z8 303 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 LGI3Q8N145 548 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 OR8H3Q8N146 312 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 Q8N1X5 172 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 Q8N9W7 124 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 DMBX1Q8NFW5 382 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 COQ8AQ8NI60 647 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RNASE11Q8TAA1 199 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 FAM216AQ8WUB2 273 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 RBPMSQ93062 196 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 FLYWCH2Q96CP2 140 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 ADTRPQ96IZ2 230 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 TMEM56Q96MV1 263 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FYTTD1Q96QD9 318 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 PHB2Q99623 299 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 FAM103A1Q9BTL3 118 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 QTRT1Q9BXR0 403 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 MAGT1Q9H0U3 335 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 MED28Q9H204 178 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 GPN1Q9HCN4 374 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 RANGRFQ9HD47 186 aaPredicted RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 PLSCR3Q9NRY6 295 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 METTL1Q9UBP6 276 aaKnown RBP4.14□□□□□ -1.75
SPG11-220ENST00000559933 FBXO7Q9Y3I1 522 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 TMEM56-RWDD3S4R434 201 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 HIVEP2P31629 2446 aa4.14□□□□□ -1.75
SPG11-220ENST00000559933 TRAV14DV4A0A0A6YYC5 116 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 A0A0B4J2A0 478 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 C5orf51A6NDU8 294 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 A6NDX4 124 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 DNAJC9-AS1A6NH13 148 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 LINC01548A6NM66 108 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 OOSP1A8MZH6 123 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 G3V3Q6 166 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 RRHO14718 337 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 NBR2O15453 112 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 TXNL1O43396 289 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 KBTBD11O94819 623 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 CA2P00918 260 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 REG1AP05451 166 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 CRYGBP07316 175 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 IAPPP10997 89 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 NQO2P16083 231 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 SRD5A1P18405 259 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 KIR2DS2P43631 304 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 IER3P46695 156 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 S100A10P60903 97 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 UBE2KP61086 200 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 ERVK-16P61578 105 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 FOXL1Q12952 345 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 PLGLAQ15195 96 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 IAH1Q2TAA2 248 aaPredicted RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 TM4SF20Q53R12 229 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 CCDC144NLQ6NUI1 221 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 C11orf88Q6PI97 169 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 Q6YL49 198 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 H2BFWTQ7Z2G1 175 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 THNSL2Q86YJ6 484 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 LRTM2Q8N967 370 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 ZBTB8BQ8NAP8 495 aaPredicted RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 OR4D5Q8NGN0 318 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 OR4C13Q8NGP0 309 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 OR5M8Q8NGP6 311 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 OR2T10Q8NGZ9 312 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 OR1S1Q8NH92 325 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 SLC25A33Q9BSK2 321 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 PDCD10Q9BUL8 212 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 RANBP3Q9H6Z4 567 aaPredicted RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 ZNF430Q9H8G1 570 aaPredicted RBP4.13□□□□□ -1.75
SPG11-220ENST00000559933 PLEKHA2Q9HB19 425 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 COMMD9Q9P000 198 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 GSKIPQ9P0R6 139 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 SHPKQ9UHJ6 478 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 LINC00527Q9UJ94 153 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 TCF19Q9Y242 345 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 KCNIP3Q9Y2W7 256 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms