RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF439Q8NDP4 499 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 ZCCHC14Q8WYQ9 949 aaKnown RBP8.24□□□□□ -1.09
LRRC28-216ENST00000559819 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 MGAQ8IWI9 3026 aa8.24□□□□□ -1.09
LRRC28-216ENST00000559819 SCO2A0A1W2PP80 73 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 FOXH1O75593 365 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 NPY1RP25929 384 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 CD40P25942 277 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 GATA4P43694 442 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 MOB3BQ86TA1 216 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 SLC24A4Q8NFF2 622 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 RAB1CQ92928 201 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 YTHDF2Q9Y5A9 579 aaKnown RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TRGV8A0A0C4DH27 118 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 PPP5D1E7EU14 171 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 IGKV1-16P04430 117 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 IGFBP2P18065 325 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 THBS3P49746 956 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 HSPE1P61604 102 aaKnown RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 CCL8P80075 99 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 STPG3Q8N7X2 389 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 ANAPC16Q96DE5 110 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 KCNIP2Q9NS61 270 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 IL19Q9UHD0 177 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 SH3BGRL2Q9UJC5 107 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 FUT9Q9Y231 359 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 LSM4Q9Y4Z0 139 aaKnown RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 OR51B2Q9Y5P1 312 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 DMRT1Q9Y5R6 373 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 RP1L1Q8IWN7 2480 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TRBV20OR9-2A0A075B6H5 130 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 SRRM4A7MD48 611 aaKnown RBP8.23□□□□□ -1.09
LRRC28-216ENST00000559819 A8MXE2 369 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 KLK10O43240 276 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 MPDU1O75352 247 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 NDUFB7P17568 137 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TIMP3P35625 211 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TMPRSS3P57727 454 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 ZNF788Q6ZQV5 615 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 WFDC8Q8IUA0 241 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 OR2T10Q8NGZ9 312 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 RND1Q92730 232 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 NPVFQ9HCQ7 196 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
LRRC28-216ENST00000559819 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 XKRY2A2RUG3 117 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 PDE6DO43924 150 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 ACTL6BO94805 426 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 CEACAM8P31997 349 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-216ENST00000559819 ENY2Q9NPA8 101 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 ITGB1BP1O14713 200 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 TMPRSS2O15393 492 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 GGCTO75223 188 aaKnown RBP8.22□□□□□ -1.09
LRRC28-216ENST00000559819 VENTXO95231 258 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 SELENOVP59797 346 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 GAMTQ14353 236 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 EFNB3Q15768 340 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 FAM57AQ8TBR7 257 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 PRDM13Q9H4Q3 707 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 PITPNC1Q9UKF7 332 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 PLCE1Q9P212 2302 aa8.22□□□□□ -1.09
LRRC28-216ENST00000559819 A0A0U1RQK1 487 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 LY86O95711 162 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 CXorf1O96002 111 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 GATA2P23769 480 aaPredicted RBP8.21□□□□□ -1.09
LRRC28-216ENST00000559819 IL3RAP26951 378 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.09
LRRC28-216ENST00000559819 MLANAQ16655 118 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 C3orf36Q3SXR2 165 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 TEPPQ6URK8 271 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 TMEM183AQ8IXX5 376 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.21□□□□□ -1.09
LRRC28-216ENST00000559819 OR1P1Q8NH06 330 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 FAM216AQ8WUB2 273 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 PFDN5Q99471 154 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 SLC35D1Q9NTN3 355 aa8.21□□□□□ -1.09
LRRC28-216ENST00000559819 ZNF729A6NN14 1252 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-216ENST00000559819 F6UZH7 168 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 J3QR06 171 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 FCN3O75636 299 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 AMBPP02760 352 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 IRF2P14316 349 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 CCL3L1P16619 93 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 TNFSF4P23510 183 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 GCHFRP30047 84 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 TMEM249Q2WGJ8 235 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 ACTL10Q5JWF8 245 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms