RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 IFNA17P01571 189 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 TMUB2Q71RG4 321 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 ZNF429Q86V71 674 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 THNSL2Q86YJ6 484 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 ARL6Q9H0F7 186 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 OR51B2Q9Y5P1 312 aa13.84□□□□□ -0.19
CHRNA3-206ENST00000559658 CGB1A6NKQ9 187 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 SNAPC5O75971 98 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 RLN2P04090 185 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 CAV2P51636 162 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM267Q0VDI3 215 aaPredicted RBP13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 VMA21Q3ZAQ7 101 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 PIFOQ8TCI5 191 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 DTD1Q8TEA8 209 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 AQP10Q96PS8 301 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 SIGLEC9Q9Y336 463 aa13.83□□□□□ -0.2
CHRNA3-206ENST00000559658 CEBPZOSA8MTT3 80 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 FAM90A26D6RGX4 464 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 RPL12P30050 165 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 LGALS7P47929 136 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 RPL8P62917 257 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 IFITM2Q01629 132 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 NHLH2Q02577 135 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 ACOT7LQ6ZUV0 252 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 HINT2Q9BX68 163 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 SMIM3Q9BZL3 60 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 LYRM2Q9NU23 88 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 NUP50Q9UKX7 468 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 NBR2O15453 112 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM11P17152 192 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 VAMP2P63027 116 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 EBI3Q14213 229 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 ZNF345Q14585 488 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM219Q86XT9 240 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 KCNRGQ8N5I3 272 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 OR2C3Q8N628 320 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 INO80EQ8NBZ0 244 aaPredicted RBP13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 OR2T10Q8NGZ9 312 aa13.82□□□□□ -0.2
CHRNA3-206ENST00000559658 ANK3Q12955 4377 aaKnown RBP13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 RRHO14718 337 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 CST7O76096 145 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 P2RY1P47900 373 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 SPCS3P61009 180 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 EWSR1Q01844 656 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 PRSS8Q16651 343 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 HAPLN4Q86UW8 402 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM252Q8N6L7 170 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 TSNAXQ99598 290 aaKnown RBP13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 SMR3AQ99954 134 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 ZFP57Q9NU63 452 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
CHRNA3-206ENST00000559658 NDUFA3O95167 84 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 APELAP0DMC3 54 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 S100A11P31949 105 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 GNB1P62873 340 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 OPCMLQ14982 345 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 PDLIM3Q53GG5 364 aaPredicted RBP13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 SPANXN5Q5MJ07 72 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 TEX45Q8NA69 505 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 VSTM2AQ8TAG5 236 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 PSENENQ9NZ42 101 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 CUBNO60494 3623 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 SH2D7A6NKC9 451 aaPredicted RBP13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 HOXA1P49639 335 aaPredicted RBP13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 ARHGDIBP52566 201 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 HSPE1P61604 102 aaKnown RBP13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 ARL16Q0P5N6 197 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 OR2F1Q13607 317 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 C19orf35Q6ZS72 473 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 PPP1R27Q86WC6 154 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 NPBQ8NG41 125 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 OR52E5Q8NH55 327 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 RAB40CQ96S21 281 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 AIFM2Q9BRQ8 373 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 FAM96BQ9Y3D0 163 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
CHRNA3-206ENST00000559658 GPR137BO60478 399 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 CA2P00918 260 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 METTL15P1P0C7V9 234 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 PVALBP20472 110 aaPredicted RBP13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 PRCDQ00LT1 54 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 PLGLAQ15195 96 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 TNXAQ16473 311 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 TMEM217Q8N7C4 229 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 OR4A5Q8NH83 315 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 SMIM8Q96KF7 97 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 SSX3Q99909 188 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 MEGF9Q9H1U4 602 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 WFDC1Q9HC57 220 aa13.79□□□□□ -0.2
CHRNA3-206ENST00000559658 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 H3BUX3 64 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 NDPQ00604 133 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 LY6EQ16553 131 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms