RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SPIN2AQ99865 258 aa11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 SPIN2BQ9BPZ2 258 aa11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 POMT1Q9Y6A1 747 aa11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-209ENST00000559551 AVPP01185 164 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 NQO2P16083 231 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 IL3RAP26951 378 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 HTR1DP28221 377 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 LOXL1Q08397 574 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 PEA15Q15121 130 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 TMEM177Q53S58 311 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 CFHR4Q92496 578 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 RHOVQ96L33 236 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 Q96MF0 132 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 IGLV2-23P01705 113 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 PAX9P55771 341 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 RELBQ01201 579 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 OR4A47Q6IF82 309 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 SMCO4Q9NRQ5 59 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
RABGGTA-209ENST00000559551 ST8SIA3O43173 380 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 GAPDHP04406 335 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 MYOD1P15172 320 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 PRSS57Q6UWY2 283 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 TMED6Q8WW62 240 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 RPEQ96AT9 228 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 CYTL1Q9NRR1 136 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 B4DSR2 109 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 APOA2P02652 100 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 CAV2P51636 162 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 UBE2E1P51965 193 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 OR2B8PP59922 312 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 C15orf54Q8N8G6 183 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 WASHC3Q9Y3C0 194 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
RABGGTA-209ENST00000559551 PIGBOS1A0A0B4J2F0 54 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 TIMM23O14925 209 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 HKR1P10072 659 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 CNTFRP26992 372 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 SRSF3P84103 164 aaKnown RBP11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 HABP2Q14520 560 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 MRGPRG-AS1Q2M3A8 158 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 HIF1ANQ9NWT6 349 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
RABGGTA-209ENST00000559551 IGHV3OR16-10A0A075B7F0 116 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 CHST1O43916 411 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 SSSCA1O60232 199 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 SSX2Q16385 188 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 OSR1Q8TAX0 266 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 SMIM8Q96KF7 97 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 ACANP16112 2415 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 FABP1P07148 127 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 PET100P0DJ07 73 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 CD24P25063 80 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 SAA4P35542 130 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 LINC01356Q8N9X3 169 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 C2CD4CQ8TF44 421 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 FLYWCH2Q96CP2 140 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 AQP10Q96PS8 301 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 TPSG1Q9NRR2 321 aa11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-209ENST00000559551 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 COLCA2A8K830 154 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 TAAR5O14804 337 aa11.47□□□□□ -0.57
RABGGTA-209ENST00000559551 HRASP01112 189 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms