RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 OR1M1Q8NGA1 313 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 GPR84Q9NQS5 396 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 RP1P56715 2156 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 ALPK2Q86TB3 2170 aa0.4□□□□□ -2.35
CASC4-210ENST00000559550 IRGMA1A4Y4 181 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 GOLGA6L10A6NI86 522 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 HSBP1L1C9JCN9 74 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 I3L521 148 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 SDCBPO00560 298 aaPredicted RBP0.39□□□□□ -2.35
CASC4-210ENST00000559550 ITGB1BP1O14713 200 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 HLA-DRAP01903 254 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 DDTP30046 118 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 CSN1S1P47710 185 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 RAB13P51153 203 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 ZNF345Q14585 488 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 SLC22A24Q8N4F4 322 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 TBC1D19Q8N5T2 526 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 OR7G1Q8NGA0 311 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 SMIM19Q96E16 107 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 ERMAPQ96PL5 475 aaPredicted RBP0.39□□□□□ -2.35
CASC4-210ENST00000559550 BAIAP2Q9UQB8 552 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 SNURFQ9Y675 71 aa0.39□□□□□ -2.35
CASC4-210ENST00000559550 RAD50Q92878 1312 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 MED12LQ86YW9 2145 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 FABP12A6NFH5 140 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 F5H768 121 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 PMP2P02689 132 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 SULT1A3P0DMM9 295 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 SULT1A4P0DMN0 295 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 HAAOP46952 286 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 PPP1R1AQ13522 171 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 ZNF846Q147U1 533 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 TEX36Q5VZQ5 186 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 TMEM251Q8N6I4 163 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 DNAJB3Q8WWF6 145 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 ANKRD7Q92527 254 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 DHRS9Q9BPW9 319 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 NDEL1Q9GZM8 345 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
CASC4-210ENST00000559550 ERICH2A1L162 156 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 IL3P08700 152 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 S100A7P31151 101 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 OR4D2P58180 307 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 SUPT4H1P63272 117 aaKnown RBP0.37□□□□□ -2.35
CASC4-210ENST00000559550 RUNX1Q01196 453 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 MGAT3Q09327 533 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 FAM78BQ5VT40 261 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 HIST2H3AQ71DI3 136 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 AQP3Q92482 292 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 SERPINI1Q99574 410 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 YIPF3Q9GZM5 350 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 TRABDQ9H4I3 376 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 SPACA1Q9HBV2 294 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 PAQR5Q9NXK6 330 aaPredicted RBP0.37□□□□□ -2.35
CASC4-210ENST00000559550 DKKL1Q9UK85 242 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 PXMP4Q9Y6I8 212 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 HEATR5AQ86XA9 2040 aa0.37□□□□□ -2.35
CASC4-210ENST00000559550 IGHV1-69-2A0A0G2JMI3 117 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 GGT3PA6NGU5 568 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 OR4C45A6NMZ5 311 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 SLC22A1O15245 554 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 KRT75O95678 551 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 IGHV3-7P01780 117 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 CLPSP04118 112 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 PSMB6P28072 239 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 FXYD2P54710 66 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 NDUFA5Q16718 116 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 C5orf46Q6UWT4 87 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 C10orf67Q8IYJ2 551 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 C12orf29Q8N999 325 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 TMEM161BQ8NDZ6 487 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 JOSD2Q8TAC2 188 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 KCTD7Q96MP8 289 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 DCUN1D5Q9BTE7 237 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 AK3Q9UIJ7 227 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 FUT9Q9Y231 359 aa0.36□□□□□ -2.35
CASC4-210ENST00000559550 LAMB4A4D0S4 1761 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 TRAV14DV4A0A0A6YYC5 116 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 COCHO43405 550 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 CDC34P49427 236 aaPredicted RBP0.35□□□□□ -2.35
CASC4-210ENST00000559550 UBE2G2P60604 165 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 POLR2GP62487 172 aaKnown RBP eCLIP0.35□□□□□ -2.35
CASC4-210ENST00000559550 OBSCN-AS1Q96MR7 158 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 C7orf50Q9BRJ6 194 aaKnown RBP0.35□□□□□ -2.35
CASC4-210ENST00000559550 SPANXB1Q9NS25 103 aaPredicted RBP0.35□□□□□ -2.35
CASC4-210ENST00000559550 RSL24D1Q9UHA3 163 aaKnown RBP0.35□□□□□ -2.35
CASC4-210ENST00000559550 POLR1DQ9Y2S0 133 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 SYNRGQ9UMZ2 1314 aa0.35□□□□□ -2.35
CASC4-210ENST00000559550 STRCQ7RTU9 1775 aa0.34□□□□□ -2.35
CASC4-210ENST00000559550 C1orf232A0A0U1RR37 186 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 C19orf84I3L1E1 186 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 KRT7P08729 469 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 SRP19P09132 144 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 METTL15P1P0C7V9 234 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 FAM228BP0C875 321 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 MAP2K4P45985 399 aa0.34□□□□□ -2.36
CASC4-210ENST00000559550 EIF2B2P49770 351 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 UBE2IP63279 158 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 RPL18Q07020 188 aaKnown RBP0.34□□□□□ -2.36
CASC4-210ENST00000559550 CDK10Q15131 360 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms