RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PLXNB1O43157 2135 aa17■□□□□ 0.31
SNX1-206ENST00000559389 A0A0G2JRQ6 117 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 C15orf61A6NNL5 157 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 SNAPC5O75971 98 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 IGHG4P01861 327 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 CD28P10747 220 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 MYOD1P15172 320 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 OR2B8PP59922 312 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 TMEM267Q0VDI3 215 aaPredicted RBP16.99■□□□□ 0.31
SNX1-206ENST00000559389 AKIRIN2Q53H80 203 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 TCTEX1D4Q5JR98 221 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 ASPHD1Q5U4P2 390 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 UNQ5815/PRO19632Q6UWF5 114 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 ZNF695Q8IW36 515 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 COMMD1Q8N668 190 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 C11orf44Q8N8P7 122 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 MINDY2Q8NBR6 621 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 ENKURQ8TC29 256 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 PRNDQ9UKY0 176 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 FOXA2Q9Y261 457 aaPredicted RBP16.99■□□□□ 0.31
SNX1-206ENST00000559389 NSG2Q9Y328 171 aa16.99■□□□□ 0.31
SNX1-206ENST00000559389 A0A1B0GW64 132 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 A0A1W2PN81 502 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 MSGN1A6NI15 193 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 CGB1A6NKQ9 187 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 CHRNA7P36544 502 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 IZUMO4Q1ZYL8 232 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 LGI3Q8N145 548 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 SLC35G3Q8N808 338 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 SPIN2AQ99865 258 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 SPIN2BQ9BPZ2 258 aa16.98■□□□□ 0.31
SNX1-206ENST00000559389 TRAV6A0A075B6T7 132 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 TEX22C9J3V5 150 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 E7EUB6 86 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 SOX15O60248 233 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 HLA-AP01891 365 aaKnown RBP16.97■□□□□ 0.31
SNX1-206ENST00000559389 OR4E1P0C645 316 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 FOXE3Q13461 319 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 ANKRD55Q3KP44 614 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 TEX38Q6PEX7 206 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 LYG2Q86SG7 212 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 FAM219AQ8IW50 185 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 RNF152Q8N8N0 203 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 LRTM2Q8N967 370 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 RNASE11Q8TAA1 199 aaKnown RBP16.97■□□□□ 0.31
SNX1-206ENST00000559389 RRNAD1Q96FB5 475 aaKnown RBP16.97■□□□□ 0.31
SNX1-206ENST00000559389 TMEM68Q96MH6 324 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 PHB2Q99623 299 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 COMMD5Q9GZQ3 224 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 ALX4Q9H161 411 aaPredicted RBP16.97■□□□□ 0.31
SNX1-206ENST00000559389 PALMDQ9NP74 551 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 TMEM14BQ9NUH8 114 aa16.97■□□□□ 0.31
SNX1-206ENST00000559389 TNCP24821 2201 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 A0A0B4J2A0 478 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 PIGBOS1A0A0B4J2F0 54 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 C9orf170A2RU37 121 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 DBX1A6NMT0 343 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 IGLV1-40P01703 118 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 OPN1MWP04001 364 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 ELANEP08246 267 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 OPN1MW2P0DN77 364 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 OPN1MW3P0DN78 364 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 PSMB8P28062 276 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
SNX1-206ENST00000559389 CD83Q01151 205 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 DHRS2Q13268 280 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 HIST2H2BDQ6DRA6 164 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 NRARPQ7Z6K4 114 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 CASTOR1Q8WTX7 329 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 LSM10Q969L4 123 aaKnown RBP16.96■□□□□ 0.31
SNX1-206ENST00000559389 CITED2Q99967 270 aaPredicted RBP16.96■□□□□ 0.31
SNX1-206ENST00000559389 SHPKQ9UHJ6 478 aa16.96■□□□□ 0.31
SNX1-206ENST00000559389 H2AFB2P0C5Z0 115 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 APELAP0DMC3 54 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 C4orf46Q504U0 113 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 THOC7Q6I9Y2 204 aaKnown RBP16.95■□□□□ 0.3
SNX1-206ENST00000559389 DUSP18Q8NEJ0 188 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 OR5M8Q8NGP6 311 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 OR5B3Q8NH48 314 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 FYTTD1Q96QD9 318 aaKnown RBP16.95■□□□□ 0.3
SNX1-206ENST00000559389 QTRT1Q9BXR0 403 aaKnown RBP16.95■□□□□ 0.3
SNX1-206ENST00000559389 FKBP11Q9NYL4 201 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 ZNF257Q9Y2Q1 563 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 OR51B2Q9Y5P1 312 aa16.95■□□□□ 0.3
SNX1-206ENST00000559389 TEX50A0A1B0GTY4 177 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 DUXBA0A1W2PPF3 345 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 HMX3A6NHT5 357 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 NMSQ5H8A3 153 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 CXorf66Q5JRM2 361 aaPredicted RBP16.94■□□□□ 0.3
SNX1-206ENST00000559389 OR1L8Q8NGR8 309 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 OR4A16Q8NH70 328 aa16.94■□□□□ 0.3
SNX1-206ENST00000559389 FAM110DQ8TAY7 271 aaPredicted RBP16.94■□□□□ 0.3
SNX1-206ENST00000559389 SRSF8Q9BRL6 282 aaKnown RBP16.94■□□□□ 0.3
SNX1-206ENST00000559389 A0A0B4J293 547 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 IGLC7A0M8Q6 106 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 DUS4LO95620 317 aaKnown RBP16.93■□□□□ 0.3
SNX1-206ENST00000559389 Q6ZRM9 215 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 LYZL2Q7Z4W2 148 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 ZNF429Q86V71 674 aa16.93■□□□□ 0.3
SNX1-206ENST00000559389 MYOZ3Q8TDC0 251 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms