RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TXNDC9O14530 226 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SULT1B1O43704 296 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 NOS1APO75052 506 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 NDUFB2O95178 105 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 NSA2O95478 260 aaKnown RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SERPINA7P05543 415 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF705DP0CH99 300 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CR1P17927 2039 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H1TP22492 207 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 DCCP43146 1447 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 RAB13P51153 203 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 FXYD7P58549 80 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 TAS2R20P59543 309 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ARF6P62330 175 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 RPL30P62888 115 aaKnown RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CDK10Q15131 360 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SS18Q15532 418 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 GRK1Q15835 563 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 LIN52Q52LA3 116 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 TNFAIP8L3Q5GJ75 292 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ALKAL1Q6UXT8 129 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SPATA12Q7Z6I5 190 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 OR6V1Q8N148 313 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ANKRD29Q8N6D5 301 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CNEP1R1Q8N9A8 125 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SGMS2Q8NHU3 365 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ACOT12Q8WYK0 555 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 RNASE6Q93091 150 aaKnown RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 BORCS7Q96B45 105 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CEP19Q96LK0 163 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 PPP1R2P1Q96PQ5 205 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 PHB2Q99623 299 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 SIGMAR1Q99720 223 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 Q9BRP9 147 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 KIFC1Q9BW19 673 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF471Q9BX82 626 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 TTTY12Q9BZ98 90 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 COMMD5Q9GZQ3 224 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 DCSTAMPQ9H295 470 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 PRTFDC1Q9NRG1 225 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 CMTM6Q9NX76 183 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 STOML2Q9UJZ1 356 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 PRELID1Q9Y255 219 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 KLK5Q9Y337 293 aaPredicted RBP1.02□□□□□ -2.25
VPS13C-207ENST00000558919 PRELID3BQ9Y3B1 194 aa1.02□□□□□ -2.25
VPS13C-207ENST00000558919 ADGRB3O60242 1522 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 ADGRL3Q9HAR2 1447 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 IGHV3-15A0A0B4J1V0 119 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 TMEM269A0A1B0GVZ9 245 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 OR4C46A6NHA9 309 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 A8MUN3 132 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 I3L521 148 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 PLA2G10O15496 165 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 CRYZL1O95825 349 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 HAND1O96004 215 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 NPYP01303 97 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 HLA-DRB1P01911 266 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 TTRP02766 147 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 SRP19P09132 144 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 MAGEA12P43365 314 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 RPL5P46777 297 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 CSN1S1P47710 185 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 RBM11P57052 281 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 AP1S1P61966 158 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 SNRPD2P62316 118 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H3AP68431 136 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 H3F3AP84243 136 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 GLO1Q04760 184 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 AKR1C1Q04828 323 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 TAF1AQ15573 450 aaPredicted RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 KCNJ8Q15842 424 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 GUK1Q16774 197 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 LGALS9BQ3B8N2 356 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 HACD4Q5VWC8 232 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 LGALS9CQ6DKI2 356 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 LPCAT3Q6P1A2 487 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 C2orf91Q6ZV80 131 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 SSX8Q7RTT4 187 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 S100A7AQ86SG5 101 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 KRT222Q8N1A0 295 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 MCFD2Q8NI22 146 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 KLK6Q92876 244 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 FGF13Q92913 245 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 WDR61Q9GZS3 305 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 NMNAT1Q9HAN9 279 aaPredicted RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 PAQR5Q9NXK6 330 aaPredicted RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 MRPL27Q9P0M9 148 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 RSL24D1Q9UHA3 163 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 FAM215AQ9Y5M1 114 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 ARL5AQ9Y689 179 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 PTPRSQ13332 1948 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 SIPA1L1O43166 1804 aa1.01□□□□□ -2.25
VPS13C-207ENST00000558919 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
VPS13C-207ENST00000558919 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 GRIN2BQ13224 1484 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 NUP160Q12769 1436 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 PTPRBP23467 1997 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 TRBV20OR9-2A0A075B6H5 130 aa1□□□□□ -2.25
VPS13C-207ENST00000558919 A0A1W2PQD3 144 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms