RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 PIGTQ969N2 578 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ADIPOR1Q96A54 375 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 STARD4Q96DR4 205 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SFRP2Q96HF1 295 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 FOXN4Q96NZ1 517 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SPACA5Q96QH8 159 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 VPS25Q9BRG1 176 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 HDHD3Q9BSH5 251 aaPredicted RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 RSG1Q9BU20 258 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 RTN4RQ9BZR6 473 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 ZDHHC11Q9H8X9 412 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 NRN1Q9NPD7 142 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 MBNL1Q9NR56 388 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 KCNIP2Q9NS61 270 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SLC7A10Q9NS82 523 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 PLEKHJ1Q9NW61 149 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SH3BGRL2Q9UJC5 107 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 NXT1Q9UKK6 140 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 PSG11Q9UQ72 335 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TBL2Q9Y4P3 447 aaKnown RBP2.64□□□□□ -1.99
HERC1-203ENST00000558532 EP400Q96L91 3159 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 SHANK1Q9Y566 2161 aa2.64□□□□□ -1.99
HERC1-203ENST00000558532 TRAV9-2A0A087WT02 112 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 IGKV3D-11A0A0A0MRZ8 115 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 IGLV3-32A0A0A0MS00 114 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 A0A0G2JRQ6 117 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 MDFIC2A0A1B0GVS7 189 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GRIFINA4D1Z8 144 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF850A8MQ14 1090 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C10orf142B7Z368 130 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C11orf94C9JXX5 98 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 NPIPA5E9PKD4 350 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 F2Z2F3 143 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 G3V4G9 280 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 HCRTR1O43613 425 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 TRAF3IP2O43734 574 aaPredicted RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 SYNGR2O43760 224 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 CD5LO43866 347 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 PDCD6O75340 191 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 EML2O95834 649 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 CA2P00918 260 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 CLEC3BP05452 202 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 P0C879 139 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C3orf79P0CE67 100 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 IGLC1P0CG04 106 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 SMIM17P0DL12 118 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GP1BBP13224 206 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OMGP23515 440 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 F2RP25116 425 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GDF1P27539 372 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GABRA2P47869 451 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 HERV-K104P61576 105 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GNB1P62873 340 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 PAX2Q02962 417 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 TMEM267Q0VDI3 215 aaPredicted RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 HLA-DRB5Q30154 266 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 KRTAP27-1Q3LI81 207 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 FFAR4Q5NUL3 377 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C10orf128Q5T292 105 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 BVES-AS1Q5T3Y7 98 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 DCAF12Q5T6F0 453 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C1orf185Q5T7R7 199 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 C9orf135Q5VTT2 229 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 CST9LP1Q5W188 147 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR4A47Q6IF82 309 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 PRR27Q6MZM9 219 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 MRPL54Q6P161 138 aaKnown RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 RASL11AQ6T310 242 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 NEGR1Q7Z3B1 354 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 VASH2Q86V25 355 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 LRP11Q86VZ4 500 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF695Q8IW36 515 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 SIGLECL1Q8N7X8 197 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF321PQ8N8H1 164 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF709Q8N972 641 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR10G3Q8NGC4 313 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR8B3Q8NGG8 313 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR4F5Q8NH21 305 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 SLC25A40Q8TBP6 338 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 SCGB1C1Q8TD33 95 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ABHD3Q8WU67 409 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 RERGQ96A58 199 aaPredicted RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 DGAT2Q96PD7 388 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR4C12Q96R67 309 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 OR8B2Q96RD0 313 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 GPER1Q99527 375 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 TXN2Q99757 166 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 TMEM147Q9BVK8 224 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 RBM24Q9BX46 236 aaKnown RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 NXF5Q9H1B4 397 aaKnown RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 MTIF3Q9H2K0 278 aaKnown RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF430Q9H8G1 570 aaPredicted RBP2.63□□□□□ -1.99
HERC1-203ENST00000558532 GNB4Q9HAV0 340 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ST20Q9HBF5 79 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 ZNF160Q9HCG1 818 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 FGF22Q9HCT0 170 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 PRTFDC1Q9NRG1 225 aa2.63□□□□□ -1.99
HERC1-203ENST00000558532 CENPMQ9NSP4 180 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms