RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 UCHL1P09936 223 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 PUSL1Q8N0Z8 303 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 TCTEX1D2Q8WW35 142 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 FAM3DQ96BQ1 224 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 AK6Q9Y3D8 172 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 A0A1B0GW64 132 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 MRPS14O60783 128 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 CA1P00915 261 aaPredicted RBP13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 HLA-GP17693 338 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 CLDN12P56749 244 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 TMEM187Q14656 261 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 C2orf76Q3KRA6 126 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 HSD17B10Q99714 261 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 PSORS1C1Q9UIG5 152 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 RAB22AQ9UL26 194 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 KCNK7Q9Y2U2 307 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
TSPAN3-204ENST00000558394 OR2T8A6NH00 312 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 GNB3P16520 340 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 TFPI2P48307 235 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 HRASLSQ9HDD0 168 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 SPATA2Q9UM82 520 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 OR2W1Q9Y3N9 320 aa13.04□□□□□ -0.32
TSPAN3-204ENST00000558394 NDUFA4O00483 81 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 ZNF124Q15973 351 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 BSCL2Q96G97 398 aaPredicted RBP13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 CMTM3Q96MX0 182 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
TSPAN3-204ENST00000558394 IGHV4-4A0A075B6R2 117 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 TMEM272A0A1B0GTI8 110 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 K7EMT4 169 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 SPSB3Q6PJ21 355 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 DHRSXQ8N5I4 330 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 GFI1Q99684 422 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
TSPAN3-204ENST00000558394 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 TRAV10A0A0B4J240 114 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 HIST1H1DP16402 221 aaKnown RBP13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 NFYAP23511 347 aaPredicted RBP13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 IRF3Q14653 427 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 PVRIGQ6DKI7 326 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 Q6ZS49 121 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 UFD1Q92890 307 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 COMMD5Q9GZQ3 224 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 BET1LQ9NYM9 111 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 TAS2R8Q9NYW2 309 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 DNAH2Q9P225 4427 aa13.01□□□□□ -0.33
TSPAN3-204ENST00000558394 IGKV3-7A0A075B6H7 116 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 M0R2N4 97 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 MFNGO00587 321 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 HLA-DQB1P01920 261 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 OR2B8PP59922 312 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 SPHARQ15513 63 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 SLC25A24Q6NUK1 477 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
TSPAN3-204ENST00000558394 MFSD4AQ8N468 514 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 UBAC2Q8NBM4 344 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 RNF2Q99496 336 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
TSPAN3-204ENST00000558394 V9GY05 133 aa13□□□□□ -0.33
TSPAN3-204ENST00000558394 CGB1A6NKQ9 187 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 C15orf62A8K5M9 175 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 P0DMU3 169 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 PAFAH1B2P68402 229 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 TIMM50Q3ZCQ8 353 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 HES5Q5TA89 166 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 LIPKQ5VXJ0 399 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 ZNF66Q6ZN08 573 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 PLCXD1Q9NUJ7 323 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 SMPXQ9UHP9 88 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 ETV7Q9Y603 341 aa12.99□□□□□ -0.33
TSPAN3-204ENST00000558394 IGKV1D-8A0A087WSZ0 117 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 RTL8CO15255 209 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 PLA2G7Q13093 441 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 POM121L12Q8N7R1 296 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 TMEM116Q8NCL8 245 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 RNF126Q9BV68 326 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
TSPAN3-204ENST00000558394 C21orf62Q9NYP8 219 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms