RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ZNF404Q494X3 552 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ZFP69Q49AA0 526 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM128Q5BJH2 165 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 AKR1C8PQ5T2L2 129 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 SPATA31B1PQ5VZV4 182 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 FBXW9Q5XUX1 488 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 RFLNAQ6ZTI6 216 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 LINC00173Q6ZV60 143 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 STRADAQ7RTN6 431 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 OOSP2Q86WS3 158 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 C20orf196Q8IYI0 205 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ZCCHC24Q8N2G6 241 aaKnown RBP3.04□□□□□ -1.92
LRRC28-205ENST00000558248 EIF4E3Q8N5X7 224 aaKnown RBP3.04□□□□□ -1.92
LRRC28-205ENST00000558248 RNASE11Q8TAA1 199 aaKnown RBP3.04□□□□□ -1.92
LRRC28-205ENST00000558248 MRPL48Q96GC5 212 aaKnown RBP3.04□□□□□ -1.92
LRRC28-205ENST00000558248 SMIM8Q96KF7 97 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 OR2A7Q96R45 310 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 GPER1Q99527 375 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 GINS3Q9BRX5 216 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 MARVELD1Q9BSK0 173 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 SLC25A2Q9BXI2 301 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 MRPL20Q9BYC9 149 aaKnown RBP3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ABCG5Q9H222 651 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 PTGES2Q9H7Z7 377 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 TMEM138Q9NPI0 162 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 SPANXCQ9NY87 97 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 NUBP2Q9Y5Y2 271 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 HEBP2Q9Y5Z4 205 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 MPDZO75970 2070 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 CUBNO60494 3623 aa3.04□□□□□ -1.92
LRRC28-205ENST00000558248 DOCK4Q8N1I0 1966 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 MEGF8Q7Z7M0 2845 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 IGHV3OR16-10A0A075B7F0 116 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 SMIM26A0A096LP01 95 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 TRAV8-3A0A0A6YYJ7 113 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 MIF4GDA9UHW6 222 aaKnown RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 C8orf87E5RJ46 101 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 UPK1AO00322 258 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PEX7O00628 323 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 COPEO14579 308 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 SERPINB7O75635 380 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 SOD1P00441 154 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 BGLAPP02818 100 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ATP5G1P05496 136 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PAEPP09466 180 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 CHTF8P0CG12 524 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF30P17039 623 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 OMGP23515 440 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ZBTB25P24278 435 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 CASP1P29466 404 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 RBMXP38159 391 aaKnown RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 RBMY1FQ15415 496 aaKnown RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 SLC25A30Q5SVS4 291 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 KDM4DQ6B0I6 523 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF343Q6P1L6 599 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 DCUN1D2Q6PH85 259 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 FBXW12Q6X9E4 464 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ZNF550Q7Z398 422 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 HSD17B13Q7Z5P4 300 aaPredicted RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 OR9I1Q8NGQ6 314 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 OR8S1Q8NH09 359 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PSMF1Q92530 271 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 TM4SF18Q96CE8 201 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 KCNS1Q96KK3 526 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PPP1R2P1Q96PQ5 205 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 SPACA5Q96QH8 159 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 OR7D2Q96RA2 312 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 EIF5A2Q9GZV4 153 aaKnown RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PLEKHF2Q9H8W4 249 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PLSCR3Q9NRY6 295 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 TAS2R1Q9NYW7 299 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 MRPL27Q9P0M9 148 aaKnown RBP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 GSKIPQ9P0R6 139 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 INSIG2Q9Y5U4 225 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ZANQ9Y493 2812 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.03□□□□□ -1.92
LRRC28-205ENST00000558248 ARID1AO14497 2285 aa3.03□□□□□ -1.92
LRRC28-205ENST00000558248 NBEAL2Q6ZNJ1 2754 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 IGHV3-35A0A0C4DH35 117 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 MAP1LC3B2A6NCE7 125 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PRORSD1PA6NEY8 169 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 FAAHO00519 579 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 MMP23AO75900 390 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 ZFAND5O76080 213 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 APOC1P02654 83 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 SLC25A1P53007 311 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 HERVK_113P61574 105 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 RHOBP62745 196 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PAX8Q06710 450 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 PRDX4Q13162 271 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 JOSD1Q15040 202 aaPredicted RBP3.02□□□□□ -1.93
LRRC28-205ENST00000558248 NSDHLQ15738 373 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 FBXL19-AS1Q494R0 122 aa3.02□□□□□ -1.93
LRRC28-205ENST00000558248 FAM201AQ5SY85 155 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms