RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 THOC7Q6I9Y2 204 aaKnown RBP8.25□□□□□ -1.09
LRRC28-204ENST00000558172 COMMD1Q8N668 190 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 KLHDC1Q8N7A1 406 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 OR4A16Q8NH70 328 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 LHFPL5Q8TAF8 219 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
LRRC28-204ENST00000558172 SPIN2AQ99865 258 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 SPIN2BQ9BPZ2 258 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 COMMD5Q9GZQ3 224 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 CACFD1Q9UGQ2 172 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 SHPKQ9UHJ6 478 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 TRAV3A0A0B4J244 114 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 TRAV41A0A0B4J266 112 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 MSGN1A6NI15 193 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 C15orf61A6NNL5 157 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 PRAF2O60831 178 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 DHFRP00374 187 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 IL5P05113 134 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 OR9G9P0C7N8 305 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 P0C879 139 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 EGR2P11161 476 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-204ENST00000558172 SSBP2P81877 361 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-204ENST00000558172 NDPQ00604 133 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 ZNF429Q86V71 674 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 OR5B3Q8NH48 314 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 CASTOR1Q8WTX7 329 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-204ENST00000558172 PHB2Q99623 299 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 MDFIQ99750 246 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 SRSF8Q9BRL6 282 aaKnown RBP8.24□□□□□ -1.09
LRRC28-204ENST00000558172 MARVELD1Q9BSK0 173 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 ZNF747Q9BV97 191 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 LINC00527Q9UJ94 153 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 ZNF257Q9Y2Q1 563 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 TMED3Q9Y3Q3 217 aa8.24□□□□□ -1.09
LRRC28-204ENST00000558172 TENM1Q9UKZ4 2725 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 TEX50A0A1B0GTY4 177 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 RBMXL2O75526 392 aaKnown RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 PPIFP30405 207 aaKnown RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 ANKRD55Q3KP44 614 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 TEX38Q6PEX7 206 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 UNQ5815/PRO19632Q6UWF5 114 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 LYZL2Q7Z4W2 148 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 HSD17B13Q7Z5P4 300 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 C3orf56Q8N813 242 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 MINDY2Q8NBR6 621 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 LFNGQ8NES3 379 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 OR5AU1Q8NGC0 362 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 OR4X2Q8NGF9 303 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 OR5M8Q8NGP6 311 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 OR1L8Q8NGR8 309 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 ZNF431Q8TF32 576 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 WIPF2Q8TF74 440 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 MITD1Q8WV92 249 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 FAM103A1Q9BTL3 118 aaKnown RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 PDCD10Q9BUL8 212 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 COA4Q9NYJ1 87 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-204ENST00000558172 NSG2Q9Y328 171 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 FBXO7Q9Y3I1 522 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 OR51B2Q9Y5P1 312 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 WSB1Q9Y6I7 421 aa8.23□□□□□ -1.09
LRRC28-204ENST00000558172 A0A0B4J293 547 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 A0A1B0GU03 582 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 G3V318 75 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 IFNA21P01568 189 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 IGHG4P01861 327 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 ELANEP08246 267 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 TRAPPC2P0DI81 140 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 TRAPPC2BP0DI82 140 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 SULT1A3P0DMM9 295 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 SULT1A4P0DMN0 295 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 SLC25A6P12236 298 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 OR2B8PP59922 312 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 HSPE1P61604 102 aaKnown RBP8.22□□□□□ -1.09
LRRC28-204ENST00000558172 CFHR3Q02985 330 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 RGS21Q2M5E4 152 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 C19orf54Q5BKX5 351 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 NMSQ5H8A3 153 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 MRPL41Q8IXM3 137 aaKnown RBP8.22□□□□□ -1.09
LRRC28-204ENST00000558172 FYTTD1Q96QD9 318 aaKnown RBP8.22□□□□□ -1.09
LRRC28-204ENST00000558172 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
LRRC28-204ENST00000558172 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
LRRC28-204ENST00000558172 A0A0G2JRQ6 117 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 A0A1W2PN81 502 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 SNRPGP15A8MWD9 76 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 TEX22C9J3V5 150 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 H3BUA1 57 aa8.21□□□□□ -1.1
LRRC28-204ENST00000558172 FBXO24O75426 580 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms