RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TMEM187Q14656 261 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 SPCS2Q15005 226 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 SSX1Q16384 188 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 KLK9Q2XQG4 91 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 C1orf100Q5SVJ3 147 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 UNQ9165/PRO28630Q6UXU0 137 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 CEACAM19Q7Z692 300 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 APRG1Q8IVJ8 170 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 OR6M1Q8NGM8 313 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 VSTM2AQ8TAG5 236 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 ENKURQ8TC29 256 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 GGHQ92820 318 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 FANCD2OSQ96PS1 177 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 DERL3Q96Q80 235 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 NICN1Q9BSH3 213 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 HDHD3Q9BSH5 251 aaPredicted RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 RNF126Q9BV68 326 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 ZNF436Q9C0F3 470 aaPredicted RBP3.79□□□□□ -1.8
SPG11-208ENST00000558155 SCPEP1Q9HB40 452 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 VCX3AQ9NNX9 186 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 C12orf4Q9NQ89 552 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 THYN1Q9P016 225 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 KLK9Q9UKQ9 250 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 HSF4Q9ULV5 492 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 PRELID3BQ9Y3B1 194 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 S4R3C0 116 aa3.79□□□□□ -1.8
SPG11-208ENST00000558155 IGHV3-35A0A0C4DH35 117 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 LOC100130705A0A1B0GUX0 176 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 TMEM14DPA8MWL7 114 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 TEX22C9J3V5 150 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 K7EMT4 169 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 EI24O14681 340 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 BET1O15155 118 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 SOCS1O15524 211 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 FABP7O15540 132 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 CYB5BO43169 146 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 DIRAS3O95661 229 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 LALBAP00709 142 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 IFNA10P01566 189 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 IFNA21P01568 189 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 IFNA17P01571 189 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 CD1AP06126 327 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 CTSDP07339 412 aaPredicted RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 IL6RP08887 468 aaPredicted RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 CD3GP09693 182 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 ZNF735P0CB33 412 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 RPA2P15927 270 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 PTBP1P26599 531 aaKnown RBP eCLIP3.78□□□□□ -1.8
SPG11-208ENST00000558155 HLA-DMBP28068 263 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 GPR183P32249 361 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 HSPA13P48723 471 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 PAFAH1B2P68402 229 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 S100A12P80511 92 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 QRFPP83859 136 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 ARFRP1Q13795 201 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 C10orf55Q5SWW7 151 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 C1orf146Q5VVC0 180 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 ZNF575Q86XF7 245 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 FAM89BQ8N5H3 189 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 ZNF645Q8N7E2 425 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 ZFP41Q8N8Y5 198 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 SLC7A6OSQ96CW6 309 aaPredicted RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 TMEM80Q96HE8 168 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 PGLYRP3Q96LB9 341 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 CMTM3Q96MX0 182 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 OR2A7Q96R45 310 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 GINS4Q9BRT9 223 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 DAZ1Q9NQZ3 744 aaKnown RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 SMPD3Q9NY59 655 aaPredicted RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 CLEC2DQ9UHP7 191 aa3.78□□□□□ -1.8
SPG11-208ENST00000558155 MRPS7Q9Y2R9 242 aaKnown RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.78□□□□□ -1.8
SPG11-208ENST00000558155 IGLV11-55A0A075B6I3 123 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TRBV6-7A0A0A0MS04 114 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 A0A0A6YYD4 124 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 PNMA8CA0A1B0GUJ8 204 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 LINC00473A8K010 186 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 NDUFA4O00483 81 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TGOLN2O43493 480 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 FCGR3BO75015 233 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 SLC22A5O76082 557 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 S1PR2O95136 353 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
SPG11-208ENST00000558155 CDK1P06493 297 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 CELP19835 753 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 CRHBPP24387 322 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 NPY1RP25929 384 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 RASSF2P50749 326 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TMEM50BP56557 158 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 UNC119Q13432 240 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 IRF3Q14653 427 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 MAJINQ3KP22 176 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 ACSM3Q53FZ2 586 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 TMEM41BQ5BJD5 291 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 IGSF11Q5DX21 431 aa3.77□□□□□ -1.81
SPG11-208ENST00000558155 LIPKQ5VXJ0 399 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms