RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SLC23A2Q9UGH3 650 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 WASHC3Q9Y3C0 194 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 KCNE3Q9Y6H6 103 aa1.78□□□□□ -2.12
SPG11-206ENST00000558093 PSME4Q14997 1843 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 UBR2Q8IWV8 1755 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 KDM5AP29375 1690 aaKnown RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 DENND4BO75064 1496 aaPredicted RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 PLCH2O75038 1416 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SSH2Q76I76 1423 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 RTL1A6NKG5 1358 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ROBO3Q96MS0 1386 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 MED23Q9ULK4 1368 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TMED7-TICAM2A0A0A6YYA0 188 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 A0A0B4J2A0 478 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 IGHV5-51A0A0C4DH38 117 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 LOC100130705A0A1B0GUX0 176 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 C5orf63A6NC05 138 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CLDN25C9JDP6 229 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CXorf1O96002 111 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CA2P00918 260 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 HLA-DRB1P01911 266 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 OPN1SWP03999 348 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 FABP3P05413 133 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SOD3P08294 240 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ADRA2AP08913 450 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TLX1NBP0CAT3 122 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SMIM17P0DL12 118 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ERGP11308 486 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ATP5G3P48201 142 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 PSMB2P49721 201 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CCL23P55773 120 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 DAD1P61803 113 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 RPS24P62847 133 aaKnown RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 HBA1P69905 142 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 PRR3P79522 188 aaKnown RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 SLC38A11Q08AI6 406 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TMEM267Q0VDI3 215 aaPredicted RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 BTN1A1Q13410 526 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 FZD2Q14332 565 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 EBPQ15125 230 aaKnown RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 CCL15Q16663 113 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ZNF181Q2M3W8 571 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 C12orf74Q32Q52 190 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 GLYATL3Q5SZD4 288 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 FAM222AQ5U5X8 452 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ANKRD22Q5VYY1 191 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 GLYATQ6IB77 296 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 LCN8Q6JVE9 175 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ATP5L2Q7Z4Y8 100 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 FAM19A3Q7Z5A8 133 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 C9orf62Q8N4C0 152 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 KRTCAP2Q8N6L1 136 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ACBD7Q8N6N7 88 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 OR11H7Q8NGC8 314 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 OR8S1Q8NH09 359 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ZNF418Q8TF45 676 aaPredicted RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 GPR146Q96CH1 333 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CMBLQ96DG6 245 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 MALSU1Q96EH3 234 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 HSD17B10Q99714 261 aaKnown RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 ANAPC13Q9BS18 74 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TMEM70Q9BUB7 260 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SNHG12Q9BXW3 62 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 GABARAPL3Q9BY60 117 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 NKX6-2Q9C056 277 aaPredicted RBP1.77□□□□□ -2.13
SPG11-206ENST00000558093 OR2J1Q9GZK6 312 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 OR8D2Q9GZM6 311 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CHST6Q9GZX3 395 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 EFCAB1Q9HAE3 211 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 TAF9BQ9HBM6 251 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 UBQLN4Q9NRR5 601 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 KCNIP2Q9NS61 270 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 XCL2Q9UBD3 114 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SHPKQ9UHJ6 478 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SNX12Q9UMY4 172 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 SIGLEC7Q9Y286 467 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 PXMP4Q9Y6I8 212 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ANAPC1Q9H1A4 1944 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 MYH13Q9UKX3 1938 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 ANKRD31Q8N7Z5 1873 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 KIF20BQ96Q89 1820 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 CUL7Q14999 1698 aa1.77□□□□□ -2.13
SPG11-206ENST00000558093 PLA2R1Q13018 1463 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 CCDC18Q5T9S5 1454 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TECPR2O15040 1411 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 HIVEP2P31629 2446 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 GPR179Q6PRD1 2367 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 KIF13AQ9H1H9 1805 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TRAV30A0A087WSZ9 112 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TRAV8-3A0A0A6YYJ7 113 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 IGHV3OR16-9A0A0B4J2B5 98 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 LOC107984640A0A0U1RRK4 108 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 SPAARA0A1B0GVQ0 90 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 DHRS12A0PJE2 317 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 LINC00862A6NCI5 91 aa1.76□□□□□ -2.13
SPG11-206ENST00000558093 PGPA6NDG6 321 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms