RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 KIF1BO60333 1816 aa1.16□□□□□ -2.22
GPHN-216ENST00000557678 MTUS2Q5JR59 1369 aa1.16□□□□□ -2.22
GPHN-216ENST00000557678 RALGAPA2Q2PPJ7 1873 aa1.16□□□□□ -2.22
GPHN-216ENST00000557678 NYNRINQ9P2P1 1898 aaKnown RBP1.16□□□□□ -2.22
GPHN-216ENST00000557678 TRBV20OR9-2A0A075B6H5 130 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 TRAV26-2A0A0B4J265 109 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 hADV38S2A0JD32 116 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 OR4C46A6NHA9 309 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 OR5K4A6NMS3 321 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 A8MUN3 132 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 ZNF878C9JN71 531 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 J3QRK9 145 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 FAAHO00519 579 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 PLA2G10O15496 165 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 ZNF189O75820 626 aaPredicted RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 C1QAP02745 245 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 SERPINE1P05121 402 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 SERPINA7P05543 415 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 RBP1P09455 135 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 GZMBP10144 247 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 IFI30P13284 250 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 HRES1P13985 223 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 CPMP14384 443 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 S100A7P31151 101 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 CSN1S1P47710 185 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 XCL1P47992 114 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 PSG4Q00888 419 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 TAF1AQ15573 450 aaPredicted RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 TAF9Q16594 264 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 KRTAP25-1Q3LHN0 102 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 SSX8Q7RTT4 187 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 LYPD6Q86Y78 171 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 ZNF676Q8N7Q3 588 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 OR52L1Q8NGH7 329 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 CLDND2Q8NHS1 167 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 SGMS2Q8NHU3 365 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 PHOSPHO2Q8TCD6 241 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 GNPDA2Q8TDQ7 276 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 TVP23CQ96ET8 276 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 IGF2BP2-AS1Q96M15 143 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 TSPAN32Q96QS1 320 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 NMNAT3Q96T66 252 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 TMEM147Q9BVK8 224 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 C20orf27Q9GZN8 174 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 WDR61Q9GZS3 305 aaKnown RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 CCDC90BQ9GZT6 254 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 AICDAQ9GZX7 198 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 ENY2Q9NPA8 101 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 MRPL16Q9NX20 251 aaKnown RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 IDI2-AS1Q9NZ38 188 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 OPTCQ9UBM4 332 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 FAM32AQ9Y421 112 aaKnown RBP1.15□□□□□ -2.23
GPHN-216ENST00000557678 NACADO15069 1562 aa1.15□□□□□ -2.23
GPHN-216ENST00000557678 ABCC12Q96J65 1359 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 IGHV3-15A0A0B4J1V0 119 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 A0A0J9YY10 115 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 EXOC1LA0A1B0GW35 172 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 A0A1B0GX78 115 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 DPRXA6NFQ7 191 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 FAM159BA6NKW6 160 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 C17orf98A8MV24 154 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 C2orf74A8MZ97 194 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 TMEM238C9JI98 176 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 G3V3Q6 166 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 TXNDC9O14530 226 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 CREBL2O60519 120 aaPredicted RBP1.14□□□□□ -2.23
GPHN-216ENST00000557678 ZNF22P17026 224 aaPredicted RBP1.14□□□□□ -2.23
GPHN-216ENST00000557678 PPIBP23284 216 aaKnown RBP1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BOP23527 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 PSMB8P28062 276 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BBP33778 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 SERPINB10P48595 397 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BDP58876 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BCP62807 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 CCL20P78556 96 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 DR1Q01658 176 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 SLC9A3R2Q15599 337 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 KCNJ8Q15842 424 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 SNCBQ16143 134 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 MIAQ16674 131 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST2H2BEQ16778 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.14□□□□□ -2.23
GPHN-216ENST00000557678 RPL22L1Q6P5R6 122 aaKnown RBP1.14□□□□□ -2.23
GPHN-216ENST00000557678 SPATA12Q7Z6I5 190 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 OR4C16Q8NGL9 310 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 OR13C4Q8NGS5 318 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 OR2T4Q8NH00 348 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 ZNF675Q8TD23 568 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 LMX1AQ8TE12 382 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 SMCR5Q8TEV8 140 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 FAM172AQ8WUF8 416 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BHQ93079 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 TOMM6Q96B49 74 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 PKMYT1Q99640 499 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BNQ99877 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 HIST1H2BMQ99879 126 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 NIPSNAP1Q9BPW8 284 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 EFCAB1Q9HAE3 211 aa1.14□□□□□ -2.23
GPHN-216ENST00000557678 C14orf105Q9NVL8 296 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms