RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SOSTQ9BQB4 213 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 COA4Q9NYJ1 87 aa9.7□□□□□ -0.86
SLIRP-211ENST00000557623 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 C13orf42A0A1B0GVH6 325 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 UPK2O00526 184 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 HLA-GP17693 338 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 PTBP1P26599 531 aaKnown RBP eCLIP9.69□□□□□ -0.86
SLIRP-211ENST00000557623 LPAR6P43657 344 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 RND3P61587 244 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 ZNF616Q08AN1 781 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 FHL3Q13643 280 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
SLIRP-211ENST00000557623 OR4D10Q8NGI6 311 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 OR5B12Q96R08 314 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 SLC2A9Q9NRM0 540 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 TMEM140Q9NV12 185 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 VWFP04275 2813 aa9.69□□□□□ -0.86
SLIRP-211ENST00000557623 ANKRD20A5PA0PJZ0 165 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 DPPA5A6NC42 116 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 HSPB1P04792 205 aaKnown RBP9.68□□□□□ -0.86
SLIRP-211ENST00000557623 IL6RP08887 468 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-211ENST00000557623 ZNF735P0CB33 412 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 APELAP0DMC3 54 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 PPP5CP53041 499 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 ZNF585BQ52M93 769 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 C10orf55Q5SWW7 151 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 CCDC71LQ8N9Z2 235 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 ADAD2Q8NCV1 583 aaKnown RBP9.68□□□□□ -0.86
SLIRP-211ENST00000557623 USMG5Q96IX5 58 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 FYTTD1Q96QD9 318 aaKnown RBP9.68□□□□□ -0.86
SLIRP-211ENST00000557623 PRRT1Q99946 306 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 ZNF257Q9Y2Q1 563 aa9.68□□□□□ -0.86
SLIRP-211ENST00000557623 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 LINC01619G3V211 115 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 SNAPC5O75971 98 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 DHFRP00374 187 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 KRASP01116 189 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 IGHV3-11P01762 117 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 RPA2P15927 270 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 PIGPP57054 158 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 SURF2Q15527 256 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-211ENST00000557623 PYDC2Q56P42 97 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 THOC7Q6I9Y2 204 aaKnown RBP9.67□□□□□ -0.86
SLIRP-211ENST00000557623 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 TSC22D3Q99576 134 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 SRSF8Q9BRL6 282 aaKnown RBP9.67□□□□□ -0.86
SLIRP-211ENST00000557623 THAP7Q9BT49 309 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-211ENST00000557623 COPZ2Q9P299 210 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 SCP2D1Q9UJQ7 156 aa9.67□□□□□ -0.86
SLIRP-211ENST00000557623 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
SLIRP-211ENST00000557623 HMX3A6NHT5 357 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FAM223BA6NKX1 122 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 F8W735 103 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 H0Y980 276 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 B3GALNT1O75752 331 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 SERPINE2P07093 398 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 G6PCP35575 357 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 AP3S2P59780 193 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 SPANXN2Q5MJ10 180 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FOXB2Q5VYV0 432 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 HSD17B13Q7Z5P4 300 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 CCDC190Q86UF4 302 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FAM223AQ8IWN6 122 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 OR13C8Q8NGS7 320 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 MARCH1Q8TCQ1 289 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 ALX4Q9H161 411 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 RANGRFQ9HD47 186 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 FKBP11Q9NYL4 201 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
SLIRP-211ENST00000557623 V9GYH0 126 aa9.66□□□□□ -0.86
SLIRP-211ENST00000557623 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 A0A087WW49 117 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 TRBV9A0A0B4J1U6 114 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 C3orf85A0A1B0GTC6 90 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 E7EUB6 86 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 ATG12O94817 140 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 CRYGCP07315 174 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.86
SLIRP-211ENST00000557623 PI3P19957 117 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 PSMB6P28072 239 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 ETV6P41212 452 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 OR2B8PP59922 312 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 RHOGP84095 191 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 FAM209BQ5JX69 171 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 H2BFWTQ7Z2G1 175 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 Q8N402 240 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 NECAP1Q8NC96 275 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms