RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 PRR13Q9NZ81 148 aa11.61□□□□□ -0.55
VIPAS39-210ENST00000557466 CGB1A6NKQ9 187 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 TSPAN15O95858 294 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 IGKV1-5P01602 117 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 OPN1MWP04001 364 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 RPLP1P05386 114 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 ELANEP08246 267 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 AKR1C2P52895 323 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 OR2B8PP59922 312 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 CADM3Q8N126 398 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 CENPSQ8N2Z9 138 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 GALNT14Q96FL9 552 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 FYTTD1Q96QD9 318 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 KLK15Q9H2R5 256 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 TBC1D24Q9ULP9 559 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 TSSC4Q9Y5U2 329 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 ANK2Q01484 3957 aa11.6□□□□□ -0.55
VIPAS39-210ENST00000557466 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 M0QZ24 198 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 CDS2O95674 445 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 FGF2P09038 288 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 P0C879 139 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 PF4V1P10720 104 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 RPL23AP62750 156 aaKnown RBP11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 IFITM3Q01628 133 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 DHODHQ02127 395 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 TMEM187Q14656 261 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 IZUMO4Q1ZYL8 232 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 C2orf68Q2NKX9 166 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 OR5T1Q8NG75 326 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 OR5M8Q8NGP6 311 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 SPIN2AQ99865 258 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 SPIN2BQ9BPZ2 258 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 FLVCR2Q9UPI3 526 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
VIPAS39-210ENST00000557466 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 C15orf61A6NNL5 157 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 SNAPC5O75971 98 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 ASAH1Q13510 395 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM128Q5BJH2 165 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM268Q5VZI3 342 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 RBPMSQ93062 196 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM68Q96MH6 324 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 KCNIP3Q9Y2W7 256 aa11.58□□□□□ -0.56
VIPAS39-210ENST00000557466 ATG12O94817 140 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 VAMP1P23763 118 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 SLC6A1P30531 599 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM65Q6PI78 240 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 SLC25A42Q86VD7 318 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 ZNF695Q8IW36 515 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 MS4A10Q96PG2 267 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM14BQ9NUH8 114 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 COA4Q9NYJ1 87 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
VIPAS39-210ENST00000557466 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 IGLC7A0M8Q6 106 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 NUDT19A8MXV4 375 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 ANXA3P12429 323 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 AREGP15514 252 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 RAB9AP51151 201 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 TPPP2P59282 170 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 DEFA5Q01523 94 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 KIAA0141Q14154 515 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 SLC35G3Q8N808 338 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 ZNF491Q8N8L2 437 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 KLHL30-AS1Q8NEE0 82 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 OR1L8Q8NGR8 309 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 OR4A16Q8NH70 328 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 IL22RA2Q969J5 263 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 ZNF355PQ9NSJ1 428 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
VIPAS39-210ENST00000557466 H3BUA1 57 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 SFT2D2O95562 160 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 TRGV3P03979 118 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 TCRBP04435 133 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 REG1AP05451 166 aa11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-210ENST00000557466 SRPXP78539 464 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms