RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TMEM140Q9NV12 185 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 VWFP04275 2813 aa9.69□□□□□ -0.86
SLIRP-209ENST00000557342 ANKRD20A5PA0PJZ0 165 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 HSPB1P04792 205 aaKnown RBP9.68□□□□□ -0.86
SLIRP-209ENST00000557342 IL6RP08887 468 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF735P0CB33 412 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 APELAP0DMC3 54 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 PPP5CP53041 499 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF846Q147U1 533 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF585BQ52M93 769 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 C10orf55Q5SWW7 151 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 CCDC71LQ8N9Z2 235 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 ADAD2Q8NCV1 583 aaKnown RBP9.68□□□□□ -0.86
SLIRP-209ENST00000557342 USMG5Q96IX5 58 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 FYTTD1Q96QD9 318 aaKnown RBP9.68□□□□□ -0.86
SLIRP-209ENST00000557342 PRRT1Q99946 306 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF257Q9Y2Q1 563 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 V9GYH0 126 aa9.68□□□□□ -0.86
SLIRP-209ENST00000557342 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 LINC01619G3V211 115 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 SNAPC5O75971 98 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 DHFRP00374 187 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 KRASP01116 189 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 IGHV3-11P01762 117 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 RPA2P15927 270 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 PIGPP57054 158 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 SURF2Q15527 256 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-209ENST00000557342 PYDC2Q56P42 97 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 THOC7Q6I9Y2 204 aaKnown RBP9.67□□□□□ -0.86
SLIRP-209ENST00000557342 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 SRSF8Q9BRL6 282 aaKnown RBP9.67□□□□□ -0.86
SLIRP-209ENST00000557342 THAP7Q9BT49 309 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-209ENST00000557342 COPZ2Q9P299 210 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 SCP2D1Q9UJQ7 156 aa9.67□□□□□ -0.86
SLIRP-209ENST00000557342 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
SLIRP-209ENST00000557342 HMX3A6NHT5 357 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 FAM223BA6NKX1 122 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 H0Y980 276 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 B3GALNT1O75752 331 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 SERPINE2P07093 398 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 G6PCP35575 357 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 AP3S2P59780 193 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 HSD17B13Q7Z5P4 300 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 FAM223AQ8IWN6 122 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 OR13C8Q8NGS7 320 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 MARCH1Q8TCQ1 289 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 ALX4Q9H161 411 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 RANGRFQ9HD47 186 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 FKBP11Q9NYL4 201 aa9.66□□□□□ -0.86
SLIRP-209ENST00000557342 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
SLIRP-209ENST00000557342 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 A0A087WW49 117 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 TRBV9A0A0B4J1U6 114 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 C3orf85A0A1B0GTC6 90 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 E7EUB6 86 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 ATG12O94817 140 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 CRYGCP07315 174 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.86
SLIRP-209ENST00000557342 PI3P19957 117 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 PSMB6P28072 239 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 OR2B8PP59922 312 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 RHOGP84095 191 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 ZNF79Q15937 498 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 FAM209BQ5JX69 171 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 H2BFWTQ7Z2G1 175 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 Q8N402 240 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 NECAP1Q8NC96 275 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 QTRT1Q9BXR0 403 aaKnown RBP9.65□□□□□ -0.86
SLIRP-209ENST00000557342 SRRQ9GZT4 340 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 SLC2A8Q9NY64 477 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
SLIRP-209ENST00000557342 A0A1B0GW64 132 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 SEC14L6B5MCN3 397 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 OVOL1O14753 267 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 CYB5BO43169 146 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 TRAPPC2P0DI81 140 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 TRAPPC2BP0DI82 140 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 CTRB1P17538 263 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 ZP3P21754 424 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 ATP5G2Q06055 141 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 PDLIM3Q53GG5 364 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-209ENST00000557342 CTRB2Q6GPI1 263 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 ZNF343Q6P1L6 599 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 TOMM5Q8N4H5 51 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 GDPD1Q8N9F7 314 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 OR51S1Q8NGJ8 323 aa9.64□□□□□ -0.87
SLIRP-209ENST00000557342 DEDD2Q8WXF8 326 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms