RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ATP6V1G3Q96LB4 118 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 TBX5Q99593 518 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM138Q9NPI0 162 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF257Q9Y2Q1 563 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 PEX16Q9Y5Y5 336 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 ETV7Q9Y603 341 aa3.33□□□□□ -1.88
SCFD1-223ENST00000557076 K7EMT4 169 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 FAM107AO95990 144 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 CST1P01037 141 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 APOA2P02652 100 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 CRYGCP07315 174 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 HTR1AP08908 422 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SERPINA2P20848 420 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 PRKACGP22612 351 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 PRDX6P30041 224 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF93P35789 620 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 CEACAM6P40199 344 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 MNAT1P51948 309 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 UBE2KP61086 200 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SNRPGP62308 76 aaKnown RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF85Q03923 595 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 IRF3Q14653 427 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 HMGN3Q15651 99 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SLC22A6Q4U2R8 563 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 TP53I3Q53FA7 332 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 C16orf54Q6UWD8 224 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 OR51A2Q8NGJ7 313 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 MRPL30Q8TCC3 161 aaKnown RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SRSF12Q8WXF0 261 aaKnown RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 DNAJC9Q8WXX5 260 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 NSL1Q96IY1 281 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 CXorf58Q96LI9 332 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 S100A13Q99584 98 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 NICN1Q9BSH3 213 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SCRT1Q9BWW7 348 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 PRRG3Q9BZD7 231 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF436Q9C0F3 470 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 DAZ1Q9NQZ3 744 aaKnown RBP3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SLC2A9Q9NRM0 540 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 SLC35D1Q9NTN3 355 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 ABRACLQ9P1F3 81 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 HSPB7Q9UBY9 170 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF221Q9UK13 617 aa3.32□□□□□ -1.88
SCFD1-223ENST00000557076 GAGE12JA6NER3 117 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 TMEM212A6NML5 194 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 TGOLN2O43493 480 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 DFFBO76075 338 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 BAG2O95816 211 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 DHFRP00374 187 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 IGHV3-23P01764 117 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 CTSDP07339 412 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 RRASP10301 218 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 HIST1H1BP16401 226 aaKnown RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 ZBTB25P24278 435 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 TPBGQ13641 420 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 TNXAQ16473 311 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 LPCAT4Q643R3 524 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 SIGIRRQ6IA17 410 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 CGB2Q6NT52 195 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 PLET1Q6UQ28 207 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF767PQ75MW2 155 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 CSNK1G2-AS1Q8NCQ2 148 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 GIMAP1Q8WWP7 306 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 IL1F10Q8WWZ1 152 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 HARBI1Q96MB7 349 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 C17orf77Q96MU5 243 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 IL4I1Q96RQ9 567 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 YTHDF1Q9BYJ9 559 aaKnown RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 RIBC2Q9H4K1 309 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 AAMDCQ9H7C9 122 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 ISG20L2Q9H9L3 353 aaKnown RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 FGFR1OP2Q9NVK5 253 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 PPP1R14DQ9NXH3 145 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 SMPD3Q9NY59 655 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 PTTG2Q9NZH5 202 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 TBC1D24Q9ULP9 559 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
SCFD1-223ENST00000557076 V9GYY5 206 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-223ENST00000557076 IGHV3-35A0A0C4DH35 117 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 A0A1B0GW64 132 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 A0A1W2PP11 408 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 GAGE10A6NGK3 116 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 C15orf62A8K5M9 175 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 J3QLW9 94 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 J3QRE1 110 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 M0R1X1 148 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 RHODO00212 210 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 NDUFA4O00483 81 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 GNGT2O14610 69 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 CREBL2O60519 120 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-223ENST00000557076 PDCD6O75340 191 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 CD5P06127 495 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 SPART-AS1P0CW21 52 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 SPP1P10451 314 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 ZNF19P17023 458 aa3.3□□□□□ -1.88
SCFD1-223ENST00000557076 PTBP1P26599 531 aaKnown RBP eCLIP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms