RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CTSDP07339 412 aaPredicted RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 LGALS1P09382 135 aaKnown RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 OR8U8P0C7N1 319 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 APELAP0DMC3 54 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 RPA2P15927 270 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 PI3P19957 117 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 G6PCP35575 357 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 PPP5CP53041 499 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF616Q08AN1 781 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 FHL3Q13643 280 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 SURF2Q15527 256 aaPredicted RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF79Q15937 498 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 BEAN1Q3B7T3 259 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 C10orf55Q5SWW7 151 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 FAAP20Q6NZ36 180 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 OR51S1Q8NGJ8 323 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 OR4C16Q8NGL9 310 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 OR6Q1Q8NGQ2 317 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 OR13C8Q8NGS7 320 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 MRGPRFQ96AM1 343 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 USMG5Q96IX5 58 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 FYTTD1Q96QD9 318 aaKnown RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 GPR61Q9BZJ8 451 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 COMMD5Q9GZQ3 224 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 SLC2A8Q9NY64 477 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 COPZ2Q9P299 210 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 SCP2D1Q9UJQ7 156 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 NPIPB5A8MRT5 1133 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 LINC01619G3V211 115 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 H0Y980 276 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 CRYGCP07315 174 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 FAUP35544 74 aaKnown RBP8.27□□□□□ -1.09
LINC00239-201ENST00000556973 RAB25P57735 213 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 AP3S2P59780 193 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 THOC7Q6I9Y2 204 aaKnown RBP8.27□□□□□ -1.09
LINC00239-201ENST00000556973 TOMM5Q8N4H5 51 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 GDPD1Q8N9F7 314 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 DEDD2Q8WXF8 326 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 SCGB3A2Q96PL1 93 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 TSC22D3Q99576 134 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
LINC00239-201ENST00000556973 RTBDNQ9BSG5 229 aaPredicted RBP8.27□□□□□ -1.09
LINC00239-201ENST00000556973 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 GPR132Q9UNW8 380 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 C14orf166Q9Y224 244 aaKnown RBP8.27□□□□□ -1.09
LINC00239-201ENST00000556973 ZNF257Q9Y2Q1 563 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 VWFP04275 2813 aa8.27□□□□□ -1.09
LINC00239-201ENST00000556973 TRBV9A0A0B4J1U6 114 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 A0A1B0GW64 132 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 CGB1A6NKQ9 187 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 ATG12O94817 140 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 DHFRP00374 187 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 MYOD1P15172 320 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 PSMB6P28072 239 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 OR2B8PP59922 312 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 KLF9Q13886 244 aaPredicted RBP8.26□□□□□ -1.09
LINC00239-201ENST00000556973 FOXB2Q5VYV0 432 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 HSD17B13Q7Z5P4 300 aaPredicted RBP8.26□□□□□ -1.09
LINC00239-201ENST00000556973 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 NECAP1Q8NC96 275 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 TRIM63Q969Q1 353 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 SEC22AQ96IW7 307 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 TP53RKQ96S44 253 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 ALX4Q9H161 411 aaPredicted RBP8.26□□□□□ -1.09
LINC00239-201ENST00000556973 RANGRFQ9HD47 186 aaPredicted RBP8.26□□□□□ -1.09
LINC00239-201ENST00000556973 MCUBQ9NWR8 336 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 OR51B2Q9Y5P1 312 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 WNK1Q9H4A3 2382 aa8.26□□□□□ -1.09
LINC00239-201ENST00000556973 TNCP24821 2201 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 NBEAL1Q6ZS30 2694 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 TEX13DA0A0J9YY54 714 aaPredicted RBP8.25□□□□□ -1.09
LINC00239-201ENST00000556973 IGKV1-39P01597 117 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 PRH1P02810 166 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 IGKV1D-39P04432 117 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 TRAPPC2P0DI81 140 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 TRAPPC2BP0DI82 140 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 AREGP15514 252 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 HIST1H1BP16401 226 aaKnown RBP8.25□□□□□ -1.09
LINC00239-201ENST00000556973 CTRB1P17538 263 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 RHOGP84095 191 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 DHODHQ02127 395 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 ZNF45Q02386 682 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 ATP5G2Q06055 141 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 KLK9Q2XQG4 91 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 SP6Q3SY56 376 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 CTRB2Q6GPI1 263 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 ZNF343Q6P1L6 599 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 OR5B3Q8NH48 314 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 OR4A16Q8NH70 328 aa8.25□□□□□ -1.09
LINC00239-201ENST00000556973 QTRT1Q9BXR0 403 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms