RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 UTS2O95399 124 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PPYP01298 95 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 C3orf79P0CE67 100 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 COX5AP20674 150 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 SRD5A2P31213 254 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OTX1P32242 354 aaPredicted RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 BIDP55957 195 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ARF3P61204 181 aaPredicted RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 FKBP1BP68106 108 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ARG2P78540 354 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 HTD2P86397 168 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF90Q03938 601 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 FUT7Q11130 342 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 SCGB2A2Q13296 93 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ELAVL3Q14576 367 aaKnown RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PDGFRLQ15198 375 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 KRTCAP3Q53RY4 240 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 NMSQ5H8A3 153 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 FAM162BQ5T6X4 162 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OTPQ5XKR4 325 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM211Q6ICI0 200 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ASCL4Q6XD76 172 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 GTF2H5Q6ZYL4 71 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 VASH2Q86V25 355 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 MTURNQ8N3F0 131 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF525Q8N782 197 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ZIC4Q8N9L1 334 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 GATSQ8NAP1 163 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR10P1Q8NGE3 313 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR8B12Q8NGG6 310 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR4P4Q8NGL7 312 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 OR11L1Q8NGX0 322 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 SGMS2Q8NHU3 365 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PLPPR1Q8TBJ4 325 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 C11orf40Q8WZ69 217 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.912e-6■■□□□ 11.9
FOXN3-213ENST00000556916 ADIPOR1Q96A54 375 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM186Q96B77 213 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 SFRP2Q96HF1 295 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 UHRF2Q96PU4 802 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 RSG1Q9BU20 258 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 MRPL13Q9BYD1 178 aaKnown RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 STRADBQ9C0K7 418 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 WDR61Q9GZS3 305 aaKnown RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 LIME1Q9H400 295 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF160Q9HCG1 818 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PRTFDC1Q9NRG1 225 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 KCNIP2Q9NS61 270 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PSENENQ9NZ42 101 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PEF1Q9UBV8 284 aaKnown RBP3.1□□□□□ -1.91
FOXN3-213ENST00000556916 SMPXQ9UHP9 88 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 TP53TG3Q9ULZ0 132 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 PTPRSQ13332 1948 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 GTF3C1Q12789 2109 aa3.1□□□□□ -1.91
FOXN3-213ENST00000556916 TNRC6AQ8NDV7 1962 aaKnown RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 HCFC1P51610 2035 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 IGKV1-9A0A0C4DH69 117 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 A0A1W2PS18 150 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 LIPT2A6NK58 231 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 CD300LBA8K4G0 201 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 SNURFLB1AK76 121 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 C11orf94C9JXX5 98 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 H0Y980 276 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 TRAPPC2LH3BP13 241 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 SH2D1BO14796 132 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 DHRS3O75911 302 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 WISP2O76076 250 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM50AO95807 157 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 TNFP01375 233 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 IGLV3-1P01715 115 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 HLA-DQA1P01909 254 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 CRYAAP02489 173 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 WNT2P09544 360 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 CISD3P0C7P0 127 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 LINC00869P0C866 280 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 SMIM17P0DL12 118 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 CYBAP13498 195 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 S100A7P31151 101 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 OPRM1P35372 400 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 CEACAM3P40198 252 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 GUCA1AP43080 201 aaPredicted RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 OR1D4P47884 311 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 RIPPLY3P57055 190 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF121P58317 390 aaPredicted RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 RPS18P62269 152 aaKnown RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM267Q0VDI3 215 aaPredicted RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM249Q2WGJ8 235 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 HLA-BQ31612 363 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 HNRNPA1L2Q32P51 320 aaKnown RBP3.09□□□□□ -1.91
FOXN3-213ENST00000556916 MS4A18Q3C1V0 323 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 PHYHD1Q5SRE7 291 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 DCAF12Q5T6F0 453 aa3.09□□□□□ -1.91
FOXN3-213ENST00000556916 PRAMEF20Q5VT98 475 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms