RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 PLEKHG7Q6ZR37 379 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 DCXRQ7Z4W1 244 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 COMMD7Q86VX2 200 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 SLC22A24Q8N4F4 322 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 SGMS2Q8NHU3 365 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 JOSD2Q8TAC2 188 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 CMTM5Q96DZ9 223 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 MAP1LC3AQ9H492 121 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 FAM96AQ9H5X1 160 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 XAGE1AQ9HD64 81 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 SNURFQ9Y675 71 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 PXMP4Q9Y6I8 212 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 POLEQ07864 2286 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
LINC00871-203ENST00000556869 HEATR5AQ86XA9 2040 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 OR51F1A6NGY5 319 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 TMEM212A6NML5 194 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 ITGB1BP1O14713 200 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 COCHO43405 550 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 HLA-DRAP01903 254 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 SULT1A3P0DMM9 295 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 SULT1A4P0DMN0 295 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 CCL5P13501 91 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 PSMB6P28072 239 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 EVX1P49640 407 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 BLVRAP53004 296 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 POLR2GP62487 172 aaKnown RBP eCLIP0.67□□□□□ -2.3
LINC00871-203ENST00000556869 TMED1Q13445 227 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 CDK10Q15131 360 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 NDUFA5Q16718 116 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 TNFAIP8L3Q5GJ75 292 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 DYNAPQ8N1N2 210 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 Q8N402 240 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 OR1M1Q8NGA1 313 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 ANKRD7Q92527 254 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 ODF3Q96PU9 254 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 SERPINI1Q99574 410 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 REG4Q9BYZ8 158 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 PAQR5Q9NXK6 330 aaPredicted RBP0.67□□□□□ -2.3
LINC00871-203ENST00000556869 AK3Q9UIJ7 227 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 BRWD1Q9NSI6 2320 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 TECTAO75443 2155 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 KIF15Q9NS87 1388 aa0.67□□□□□ -2.3
LINC00871-203ENST00000556869 REREQ9P2R6 1566 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 RP1P56715 2156 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 TRAV14DV4A0A0A6YYC5 116 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 IGKV1-9A0A0C4DH69 117 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 IGHV1-69-2A0A0G2JMI3 117 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 OR4C45A6NMZ5 311 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 C21orf140B9A014 251 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 TRAPPC2LH3BP13 241 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 PMP2P02689 132 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 KCNE1P15382 129 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
LINC00871-203ENST00000556869 C10orf67Q8IYJ2 551 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 Q8N2B8 174 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 C9orf163Q8N9P6 203 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 TMEM161BQ8NDZ6 487 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 CFAP53Q96M91 514 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 OR8D2Q9GZM6 311 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 DRC3Q9H069 523 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 PLEKHJ1Q9NW61 149 aa0.66□□□□□ -2.3
LINC00871-203ENST00000556869 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
LINC00871-203ENST00000556869 RAD50Q92878 1312 aa0.65□□□□□ -2.3
LINC00871-203ENST00000556869 SETD5Q9C0A6 1442 aa0.65□□□□□ -2.3
LINC00871-203ENST00000556869 ROS1P08922 2347 aa0.65□□□□□ -2.3
LINC00871-203ENST00000556869 TRBV10-2A0A0K0K1G8 114 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 LINC00854A0A1B0GVQ3 168 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 DISC1C4P0D8 188 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 LST1O00453 97 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 RPL12P30050 165 aaKnown RBP0.65□□□□□ -2.31
LINC00871-203ENST00000556869 MAP2K4P45985 399 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 RUNX1Q01196 453 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 BATFQ16520 125 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 CLEC6AQ6EIG7 209 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 DHFR2Q86XF0 187 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 FAM9CQ8IZT9 166 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 LINC00471Q8N535 108 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 WFDC11Q8NEX6 87 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 DIRAS2Q96HU8 199 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 OR51I2Q9H344 312 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 RSL24D1Q9UHA3 163 aaKnown RBP0.65□□□□□ -2.31
LINC00871-203ENST00000556869 BAIAP2Q9UQB8 552 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 FUT9Q9Y231 359 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 GMEB1Q9Y692 573 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 KIF24Q5T7B8 1368 aa0.65□□□□□ -2.31
LINC00871-203ENST00000556869 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
LINC00871-203ENST00000556869 C1orf232A0A0U1RR37 186 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 M0QX08 132 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 NOS1APO75052 506 aaPredicted RBP0.64□□□□□ -2.31
LINC00871-203ENST00000556869 YEATS4O95619 227 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 APOEP02649 317 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 SRP19P09132 144 aaKnown RBP0.64□□□□□ -2.31
LINC00871-203ENST00000556869 METTL15P1P0C7V9 234 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 CCL1P22362 96 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 NFYAP23511 347 aaPredicted RBP0.64□□□□□ -2.31
LINC00871-203ENST00000556869 CTAG1AP78358 180 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 MGAT3Q09327 533 aa0.64□□□□□ -2.31
LINC00871-203ENST00000556869 ZNF345Q14585 488 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms