RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 ZMAT5Q9UDW3 170 aaKnown RBP17.36■□□□□ 0.37
PABPN1-207ENST00000556821 FAM223BA6NKX1 122 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 NPIPB5A8MRT5 1133 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 H3BMQ9 156 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 RPA2P15927 270 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 UCP3P55916 312 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 ZNF429Q86V71 674 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 FAM223AQ8IWN6 122 aa17.35■□□□□ 0.37
PABPN1-207ENST00000556821 SAP30O75446 220 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 CD3DP04234 171 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 ZP3P21754 424 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 LPAR6P43657 344 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 OR2B8PP59922 312 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 DEFB121Q5J5C9 76 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 LHFPL1Q86WI0 220 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 DMBX1Q8NFW5 382 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 ISOC1Q96CN7 298 aa17.34■□□□□ 0.37
PABPN1-207ENST00000556821 PEF1Q9UBV8 284 aaKnown RBP17.34■□□□□ 0.37
PABPN1-207ENST00000556821 MARCH11A6NNE9 402 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 OR2J3O76001 311 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 CRYGCP07315 174 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 EXOSC2Q13868 293 aaKnown RBP17.33■□□□□ 0.36
PABPN1-207ENST00000556821 RNASE10Q5GAN6 216 aaKnown RBP17.33■□□□□ 0.36
PABPN1-207ENST00000556821 SLC25A42Q86VD7 318 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 NECAP1Q8NC96 275 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 OR4D10Q8NGI6 311 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 C15orf40Q8WUR7 153 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 FANCD2OSQ96PS1 177 aa17.33■□□□□ 0.36
PABPN1-207ENST00000556821 SLIRPQ9GZT3 109 aaKnown RBP17.33■□□□□ 0.36
PABPN1-207ENST00000556821 ZNF256Q9Y2P7 627 aaPredicted RBP17.33■□□□□ 0.36
PABPN1-207ENST00000556821 IGLC7A0M8Q6 106 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 GABARAPH6UMI1 98 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 FGF2P09038 288 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 CTRB1P17538 263 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 PSMB6P28072 239 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 KLF5Q13887 457 aaPredicted RBP17.32■□□□□ 0.36
PABPN1-207ENST00000556821 CTRB2Q6GPI1 263 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 LPCAT3Q6P1A2 487 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 TBC1D26Q86UD7 250 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 SLC38A6Q8IZM9 456 aa17.32■□□□□ 0.36
PABPN1-207ENST00000556821 LSM4Q9Y4Z0 139 aaKnown RBP17.32■□□□□ 0.36
PABPN1-207ENST00000556821 DYNC2H1Q8NCM8 4307 aaKnown RBP17.32■□□□□ 0.36
PABPN1-207ENST00000556821 CD74P04233 296 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 REG1AP05451 166 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 TBPP20226 339 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 ATP5G2Q06055 141 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 KLK9Q2XQG4 91 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 C15orf32Q32M92 178 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 ARRDC1Q8N5I2 433 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 KLK9Q9UKQ9 250 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 CEPT1Q9Y6K0 416 aa17.31■□□□□ 0.36
PABPN1-207ENST00000556821 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 BMPR1BO00238 502 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 KRASP01116 189 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 G6PCP35575 357 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 ERVK-16P61578 105 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 CADM3Q8N126 398 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 TMEM229BQ8NBD8 167 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 SMIM4Q8WVI0 70 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 COMMD5Q9GZQ3 224 aa17.3■□□□□ 0.36
PABPN1-207ENST00000556821 FAM212BQ9NTI7 297 aaPredicted RBP17.3■□□□□ 0.36
PABPN1-207ENST00000556821 SACSQ9NZJ4 4579 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.29■□□□□ 0.36
PABPN1-207ENST00000556821 NOL3O60936 208 aaKnown RBP17.29■□□□□ 0.36
PABPN1-207ENST00000556821 IFNA6P05013 189 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 SPNP16150 400 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 SYNJ2BPP57105 145 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 TAS2R19P59542 299 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 MRPS10P82664 201 aaKnown RBP17.29■□□□□ 0.36
PABPN1-207ENST00000556821 IL34Q6ZMJ4 242 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 OR10W1Q8NGF6 305 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 DIRAS2Q96HU8 199 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 KRTAP17-1Q9BYP8 105 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 C6orf62Q9GZU0 229 aaPredicted RBP17.29■□□□□ 0.36
PABPN1-207ENST00000556821 FBXL7Q9UJT9 491 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 DMRT1Q9Y5R6 373 aa17.29■□□□□ 0.36
PABPN1-207ENST00000556821 IGLV11-55A0A075B6I3 123 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 NDUFB8O95169 186 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 IGKV1-39P01597 117 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 IGKV1D-39P04432 117 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 PI3P19957 117 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 SSBP1Q04837 148 aaKnown RBP17.28■□□□□ 0.36
PABPN1-207ENST00000556821 OR9G4Q8NGQ1 327 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 MRGPRFQ96AM1 343 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 OR4C12Q96R67 309 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 QTRT1Q9BXR0 403 aaKnown RBP17.28■□□□□ 0.36
PABPN1-207ENST00000556821 NSG2Q9Y328 171 aa17.28■□□□□ 0.36
PABPN1-207ENST00000556821 TEX50A0A1B0GTY4 177 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 CTDSPLO15194 276 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 RAB3DO95716 219 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 IGLV1-51P01701 117 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 PTBP1P26599 531 aaKnown RBP eCLIP17.27■□□□□ 0.36
PABPN1-207ENST00000556821 S100GP29377 79 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 PPP5CP53041 499 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 RND3P61587 244 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 DCTN2Q13561 401 aaKnown RBP17.27■□□□□ 0.36
PABPN1-207ENST00000556821 IL18Q14116 193 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 RPEL1Q2QD12 228 aa17.27■□□□□ 0.36
PABPN1-207ENST00000556821 FAAP20Q6NZ36 180 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms