RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TCTEX1D2Q8WW35 142 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 CYGBQ8WWM9 190 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 RAB3CQ96E17 227 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 SMPD3Q9NY59 655 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-219ENST00000556432 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
ACTN1-219ENST00000556432 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 SLC17A2O00624 439 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 CDK1P06493 297 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 HLA-GP17693 338 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 RPL30P62888 115 aaKnown RBP10.17□□□□□ -0.78
ACTN1-219ENST00000556432 OGFRL1Q5TC84 451 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-219ENST00000556432 AHSA2Q719I0 299 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
ACTN1-219ENST00000556432 HRASLSQ9HDD0 168 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 THYN1Q9P016 225 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 DNAH2Q9P225 4427 aa10.17□□□□□ -0.78
ACTN1-219ENST00000556432 CASQ2O14958 399 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 DENRO43583 198 aaKnown RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 MRPS14O60783 128 aaKnown RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 PTBP1P26599 531 aaKnown RBP eCLIP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 TALDO1P37837 337 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 PVRIGQ6DKI7 326 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 Q6ZTC4 211 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 NRG4Q8WWG1 115 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 HRH4Q9H3N8 390 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 SPATA2Q9UM82 520 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 KCNK7Q9Y2U2 307 aa10.16□□□□□ -0.78
ACTN1-219ENST00000556432 RBMX2Q9Y388 322 aaKnown RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 AK6Q9Y3D8 172 aaKnown RBP10.16□□□□□ -0.78
ACTN1-219ENST00000556432 NDUFA4O00483 81 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 CYB5BO43169 146 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 HRASP01112 189 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 P0DMU3 169 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 GNB3P16520 340 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 GADD45AP24522 165 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 GBGT1Q8N5D6 347 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 UBAC2Q8NBM4 344 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 BSCL2Q96G97 398 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-219ENST00000556432 CMTM3Q96MX0 182 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 RNF2Q99496 336 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 CENPOQ9BU64 300 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 TAS2R8Q9NYW2 309 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 KLK9Q9UKQ9 250 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
ACTN1-219ENST00000556432 IGHV3-49A0A0A0MS15 119 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 IGHV4-28A0A0C4DH34 117 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 UCHL1P09936 223 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 NFYAP23511 347 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-219ENST00000556432 SPSB3Q6PJ21 355 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 NANOGP1Q8N7R0 232 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 Q8NAQ8 132 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 TMEM203Q969S6 136 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 GFI1Q99684 422 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 HSD17B10Q99714 261 aaKnown RBP10.14□□□□□ -0.79
ACTN1-219ENST00000556432 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 OR2W1Q9Y3N9 320 aa10.14□□□□□ -0.79
ACTN1-219ENST00000556432 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
ACTN1-219ENST00000556432 IGHV3-21A0A0B4J1V1 117 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 TMEM272A0A1B0GTI8 110 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 CGB1A6NKQ9 187 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 SLC22A5O76082 557 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 GNAO1P09471 354 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 CD37P11049 281 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 OR2B8PP59922 312 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 PLA2G7Q13093 441 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 C2orf76Q3KRA6 126 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 PACRGLQ8N7B6 248 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 CHRDL1Q9BU40 450 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 MND1Q9BWT6 205 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 COMMD5Q9GZQ3 224 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 SMPXQ9UHP9 88 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
ACTN1-219ENST00000556432 IGKV1D-8A0A087WSZ0 117 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 C15orf62A8K5M9 175 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 K7EMT4 169 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 YIF1AO95070 293 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
ACTN1-219ENST00000556432 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 HIST1H1DP16402 221 aaKnown RBP10.12□□□□□ -0.79
ACTN1-219ENST00000556432 RANBP1P43487 201 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 AQP4P55087 323 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
ACTN1-219ENST00000556432 SSX1Q16384 188 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 TIMM50Q3ZCQ8 353 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 Q56UQ5 140 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 LEMD1Q68G75 181 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 SLC25A24Q6NUK1 477 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 OR10R2Q8NGX6 335 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 GPHA2Q96T91 129 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms