RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 XRCC3O43542 346 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GPX5O75715 221 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 CDRT1O95170 752 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 APOA1P02647 267 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GLAP06280 429 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 TRAPPC2P0DI81 140 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 TRAPPC2BP0DI82 140 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 SAA2P0DJI9 122 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GTF2F2P13984 249 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 RCC1P18754 421 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 S100A5P33763 92 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 PPP1CCP36873 323 aaKnown RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 MAP2K4P45985 399 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 DAPP51397 102 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 ATP5G2Q06055 141 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GPR176Q14439 515 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 SPCS2Q15005 226 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 MEDAGQ5VYS4 303 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 C12orf73Q69YU5 71 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 FAM131AQ6UXB0 335 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 KIR2DL5AQ8N109 375 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GVQW1Q8N7I0 195 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 OR2AK2Q8NG84 335 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 KIR2DL5BQ8NHK3 375 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GRPEL2Q8TAA5 225 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 C11orf45Q8TAV5 145 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 GALMQ96C23 342 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 PELI1Q96FA3 418 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 Q96MT0 163 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 CMTM3Q96MX0 182 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 SLIRPQ9GZT3 109 aaKnown RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 CCDC90BQ9GZT6 254 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 NAA50Q9GZZ1 169 aaKnown RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 RIBC2Q9H4K1 309 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 PSORS1C1Q9UIG5 152 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 WASHC3Q9Y3C0 194 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
ATXN3-239ENST00000556315 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
ATXN3-239ENST00000556315 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 TRAV25A0A0B4J276 109 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 IRGMA1A4Y4 181 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 J3QLW9 94 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 M0R129 80 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 LGALS9O00182 355 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 BMPR1BO00238 502 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 MAS1P04201 325 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 CDK1P06493 297 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 CD36P16671 472 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF19P17023 458 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SERPINA2P20848 420 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 CBLN1P23435 193 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 PTBP1P26599 531 aaKnown RBP eCLIP3.55□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-239ENST00000556315 PSMB9P28065 219 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 NANOS2P60321 138 aaKnown RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 GNMTQ14749 295 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 DEFB135Q30KP9 77 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SLC22A6Q4U2R8 563 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SPANXN2Q5MJ10 180 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 DMKNQ6E0U4 476 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 RAB12Q6IQ22 244 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 OR51A2Q8NGJ7 313 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 OR8J1Q8NGP2 316 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 TSEN15Q8WW01 171 aaKnown RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 MRPL48Q96GC5 212 aaKnown RBP3.55□□□□□ -1.84
ATXN3-239ENST00000556315 SULT4A1Q9BR01 284 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 DCSTAMPQ9H295 470 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 COA4Q9NYJ1 87 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
ATXN3-239ENST00000556315 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 TMEM212A6NML5 194 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 SNTNA6NMZ2 147 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 IGLL5B9A064 214 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 J3QRE1 110 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 J3QRK9 145 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 ITGB1BP1O14713 200 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 GGCTO75223 188 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 WBP4O75554 376 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 SC5DO75845 299 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 OR2C1O95371 312 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 CRYGBP07316 175 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 CTRB1P17538 263 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 GABRB1P18505 474 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 FUT3P21217 361 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms