RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ARRDC1Q8N5I2 433 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 MRAPQ8TCY5 172 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 SMIM4Q8WVI0 70 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 FCAMRQ8WWV6 532 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 USMG5Q96IX5 58 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 SSBP4Q9BWG4 385 aaPredicted RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 SLIRPQ9GZT3 109 aaKnown RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 C6orf62Q9GZU0 229 aaPredicted RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 HRASLSQ9HDD0 168 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 RABL2AQ9UBK7 228 aaPredicted RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 ZMAT5Q9UDW3 170 aaKnown RBP8.9□□□□□ -0.98
SLIRP-205ENST00000556310 RABL2BQ9UNT1 228 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 CEPT1Q9Y6K0 416 aa8.9□□□□□ -0.98
SLIRP-205ENST00000556310 FAM223BA6NKX1 122 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 MARCH11A6NNE9 402 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 OVOL1O14753 267 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 CD74P04233 296 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 IL6RP08887 468 aaPredicted RBP8.89□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF735P0CB33 412 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 SLURP1P55000 103 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 TAS2R19P59542 299 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 ERVK-16P61578 105 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 DEFA5Q01523 94 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 PHLDA2Q53GA4 152 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 LHFPL1Q86WI0 220 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 TTC9CQ8N5M4 171 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 TMEM229BQ8NBD8 167 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 DMBX1Q8NFW5 382 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 DCUN1D4Q92564 292 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 DIRAS2Q96HU8 199 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 FAM212BQ9NTI7 297 aaPredicted RBP8.89□□□□□ -0.99
SLIRP-205ENST00000556310 TMEM140Q9NV12 185 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF257Q9Y2Q1 563 aa8.89□□□□□ -0.99
SLIRP-205ENST00000556310 TRBV9A0A0B4J1U6 114 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 A0A1B0GW64 132 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 DPPA5A6NC42 116 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 HMX3A6NHT5 357 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 E7EUB6 86 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 UPK2O00526 184 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 CTDSPLO15194 276 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 ZP3P21754 424 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 INSL3P51460 131 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 RHOGP84095 191 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF45Q02386 682 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 IL18Q14116 193 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF343Q6P1L6 599 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 CADM3Q8N126 398 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 MCFD2Q8NI22 146 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 DLX4Q92988 240 aaPredicted RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF486Q96H40 463 aaPredicted RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 NXF2Q9GZY0 626 aaKnown RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 RBM38Q9H0Z9 239 aaKnown RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 RANGRFQ9HD47 186 aaPredicted RBP8.88□□□□□ -0.99
SLIRP-205ENST00000556310 SLC2A9Q9NRM0 540 aa8.88□□□□□ -0.99
SLIRP-205ENST00000556310 TRAV3A0A0B4J244 114 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 WI2-2373I1.2A0A1W2PRP0 233 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 CCDC160A6NGH7 325 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 K7EIL1 84 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 RAB3DO95716 219 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 PRH1P02810 166 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 MYOD1P15172 320 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 AREGP15514 252 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 LPAR6P43657 344 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 OR2B8PP59922 312 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 RND3P61587 244 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 MEF2DQ14814 521 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 THOC7Q6I9Y2 204 aaKnown RBP8.87□□□□□ -0.99
SLIRP-205ENST00000556310 STEAP1BQ6NZ63 245 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 NECAP1Q8NC96 275 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 OR4D10Q8NGI6 311 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 SRSF8Q9BRL6 282 aaKnown RBP8.87□□□□□ -0.99
SLIRP-205ENST00000556310 COMMD5Q9GZQ3 224 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
SLIRP-205ENST00000556310 ANKRD34BA5PLL1 514 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 CGB1A6NKQ9 187 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF701M0R085 212 aaPredicted RBP8.86□□□□□ -0.99
SLIRP-205ENST00000556310 DHFRP00374 187 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 KRASP01116 189 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 CRYGCP07315 174 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 PGAM2P15259 253 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 RPA2P15927 270 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 CTRB1P17538 263 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 PTBP1P26599 531 aaKnown RBP eCLIP8.86□□□□□ -0.99
SLIRP-205ENST00000556310 PSMB6P28072 239 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 PPP5CP53041 499 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 EXOSC2Q13868 293 aaKnown RBP8.86□□□□□ -0.99
SLIRP-205ENST00000556310 FAM209BQ5JX69 171 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 CTRB2Q6GPI1 263 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF429Q86V71 674 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 QTRT1Q9BXR0 403 aaKnown RBP8.86□□□□□ -0.99
SLIRP-205ENST00000556310 PEF1Q9UBV8 284 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms