RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 UNQ5815/PRO19632Q6UWF5 114 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SHISA2Q6UWI4 295 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 NUDT15Q9NV35 164 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 TNCP24821 2201 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 TRAV6A0A075B6T7 132 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 SFT2D2O95562 160 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 OPN1MWP04001 364 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 OR4E1P0C645 316 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 OPN1MW2P0DN77 364 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 OPN1MW3P0DN78 364 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 RPL27AP46776 148 aaKnown RBP11.11□□□□□ -0.63
SNX6-206ENST00000556162 C4orf46Q504U0 113 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 C10orf99Q6UWK7 81 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 LGI3Q8N145 548 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 LHFPL5Q8TAF8 219 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 CITED1Q99966 193 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 PRNDQ9UKY0 176 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 NSG2Q9Y328 171 aa11.11□□□□□ -0.63
SNX6-206ENST00000556162 FBXO24O75426 580 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 H2AFB2P0C5Z0 115 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 PPIFP30405 207 aaKnown RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 RAB25P57735 213 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 CFHR3Q02985 330 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 C10orf55Q5SWW7 151 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 CASTOR1Q8WTX7 329 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 FYTTD1Q96QD9 318 aaKnown RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 ALX4Q9H161 411 aaPredicted RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 A0A1W2PN81 502 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 C9orf170A2RU37 121 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 IGHG4P01861 327 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 CD28P10747 220 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 MYOD1P15172 320 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 CHRNA7P36544 502 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 NRARPQ7Z6K4 114 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 DUSP18Q8NEJ0 188 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
SNX6-206ENST00000556162 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
SNX6-206ENST00000556162 A0A0B4J2A0 478 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 E7EUB6 86 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 ELANEP08246 267 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 APELAP0DMC3 54 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 OR2B8PP59922 312 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 DHRS2Q13268 280 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 IZUMO4Q1ZYL8 232 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 SLC35G3Q8N808 338 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 OR5M8Q8NGP6 311 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 LSM10Q969L4 123 aaKnown RBP11.09□□□□□ -0.63
SNX6-206ENST00000556162 SHPKQ9UHJ6 478 aa11.09□□□□□ -0.63
SNX6-206ENST00000556162 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 P0C879 139 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 FOXE3Q13461 319 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 ANKRD55Q3KP44 614 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TMEM65Q6PI78 240 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 LYG2Q86SG7 212 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
SNX6-206ENST00000556162 PALMDQ9NP74 551 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TMEM14BQ9NUH8 114 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 A0A0B4J293 547 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 HMX3A6NHT5 357 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TRAPPC2P0DI81 140 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TRAPPC2BP0DI82 140 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 CD83Q01151 205 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 TCTEX1D4Q5JR98 221 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 CXorf66Q5JRM2 361 aaPredicted RBP11.08□□□□□ -0.64
SNX6-206ENST00000556162 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
SNX6-206ENST00000556162 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
SNX6-206ENST00000556162 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
SNX6-206ENST00000556162 DUXBA0A1W2PPF3 345 aa11.07□□□□□ -0.64
SNX6-206ENST00000556162 DBX1A6NMT0 343 aa11.07□□□□□ -0.64
SNX6-206ENST00000556162 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
SNX6-206ENST00000556162 DUS4LO95620 317 aaKnown RBP11.07□□□□□ -0.64
SNX6-206ENST00000556162 PF4V1P10720 104 aa11.07□□□□□ -0.64
SNX6-206ENST00000556162 PSMB8P28062 276 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms