RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OTORQ9NRC9 128 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 A0A1B0GUT8 65 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 ZIC3O60481 467 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 PARLQ9H300 379 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 PRO1933Q9H354 126 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 SDF2L1Q9HCN8 221 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-216ENST00000556083 PQLC2LA1A4F0 135 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 IL6RP08887 468 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-216ENST00000556083 ZFP36L1Q07352 338 aaKnown RBP9.07□□□□□ -0.96
ACTN1-216ENST00000556083 C19orf48Q6RUI8 117 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF600Q6ZNG1 722 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 FBXL7Q9UJT9 491 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 ARFGEF1Q9Y6D6 1849 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 J3KRW8 73 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 PRSS2P07478 247 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF56Q15929 161 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 WDYHV1Q96HA8 205 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 HIST1H4GQ99525 98 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 RARRES2Q99969 163 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 TUBA4BQ9H853 241 aa9.07□□□□□ -0.96
ACTN1-216ENST00000556083 TRBV6-7A0A0A0MS04 114 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 A0A1W2PP11 408 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 NBR2O15453 112 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 NHLRC3Q5JS37 347 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 LINC00305Q7Z4B0 112 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 FOXJ2Q9P0K8 574 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 CARHSP1Q9Y2V2 147 aaKnown RBP9.06□□□□□ -0.96
ACTN1-216ENST00000556083 IGHV3-72A0A0B4J1Y9 119 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 ATXN7O15265 892 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-216ENST00000556083 CRYBB3P26998 211 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 MED19A0JLT2 244 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-216ENST00000556083 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-216ENST00000556083 MINOS1Q5TGZ0 78 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 NRTNQ99748 197 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 MRPL13Q9BYD1 178 aaKnown RBP9.06□□□□□ -0.96
ACTN1-216ENST00000556083 SEMA5BQ9P283 1151 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 PAM16Q9Y3D7 125 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 MINOS1-NBL1R4GNA1 71 aa9.06□□□□□ -0.96
ACTN1-216ENST00000556083 TRBV20OR9-2A0A075B6H5 130 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 A0A1W2PRE2 83 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 TMEM8BA6NDV4 472 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF98A6NK75 572 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-216ENST00000556083 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 MIA3Q5JRA6 1907 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 UPK2O00526 184 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 PEX7O00628 323 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 NTN1O95631 604 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 TBR1Q16650 682 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 GOLT1AQ6ZVE7 132 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 TTC9CQ8N5M4 171 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 FAM169BQ8N8A8 192 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF257Q9Y2Q1 563 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
ACTN1-216ENST00000556083 RFLNBQ8N5W9 214 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
ACTN1-216ENST00000556083 UNC13CQ8NB66 2214 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 TFPI2P48307 235 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 SPATA45Q537H7 98 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 AICDAQ9GZX7 198 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 JKAMPQ9P055 326 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 NTN3O00634 580 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 OVOL1O14753 267 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 TYMSP04818 313 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF250P15622 560 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 ZNF414Q96IQ9 312 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 NINQ8N4C6 2090 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 C4orf51C9J302 202 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 FAM89BQ8N5H3 189 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 RCC1LQ96I51 464 aaKnown RBP9.04□□□□□ -0.96
ACTN1-216ENST00000556083 H3BVH4 76 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 SRIP30626 198 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 PSG7Q13046 419 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 NUDT11Q96G61 164 aa9.04□□□□□ -0.96
ACTN1-216ENST00000556083 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 IGHV3-21A0A0B4J1V1 117 aa9.03□□□□□ -0.96
ACTN1-216ENST00000556083 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms