RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 OR2F1Q13607 317 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 MMDQ15546 238 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 ZNF429Q86V71 674 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 NANPQ8TBE9 248 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 DTD1Q8TEA8 209 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 COMMD5Q9GZQ3 224 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 ARL6Q9H0F7 186 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 FBXL15Q9H469 300 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 C11orf1Q9H5F2 150 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 ENY2Q9NPA8 101 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 TPSG1Q9NRR2 321 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 PSENENQ9NZ42 101 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 CACFD1Q9UGQ2 172 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 TCF19Q9Y242 345 aa7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 SOX21Q9Y651 276 aaPredicted RBP7.74□□□□□ -1.17
HNRNPC-220ENST00000555585 VPS13CQ709C8 3753 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 NAV2Q8IVL1 2488 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 TEX50A0A1B0GTY4 177 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 KANTRA0A1W2PQU2 76 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 RNF222A6NCQ9 220 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 MSGN1A6NI15 193 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 H3BP45 60 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 RRHO14718 337 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 NBR2O15453 112 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 ACTL6BO94805 426 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OPN1MWP04001 364 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 CRYGBP07316 175 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OPN1MW2P0DN77 364 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OPN1MW3P0DN78 364 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 HKR1P10072 659 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 S100A11P31949 105 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 F2RL1P55085 397 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 PAX9P55771 341 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 BPIFB3P59826 476 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 GNB1P62873 340 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 EBI3Q14213 229 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OPCMLQ14982 345 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 TNXAQ16473 311 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 AARDQ4LEZ3 155 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 THNSL2Q86YJ6 484 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 MMD2Q8IY49 270 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 KCNRGQ8N5I3 272 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OR2C3Q8N628 320 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OR1L8Q8NGR8 309 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 OR52E5Q8NH55 327 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 SMIM8Q96KF7 97 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 AQP10Q96PS8 301 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 CIB3Q96Q77 187 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 SLC25A31Q9H0C2 315 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 MEGF9Q9H1U4 602 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 HIPK2Q9H2X6 1198 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 ZNF430Q9H8G1 570 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 HEYLQ9NQ87 328 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 PAIP2BQ9ULR5 123 aaKnown RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 SIGLEC9Q9Y336 463 aa7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 TET2Q6N021 2002 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-220ENST00000555585 ASH1LQ9NR48 2969 aaKnown RBP7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 TMEM50AO95807 157 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 TAS2R30P59541 319 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 EWSR1Q01844 656 aaKnown RBP eCLIP7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 TMEM267Q0VDI3 215 aaPredicted RBP7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 PJVKQ0ZLH3 352 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 ZNF345Q14585 488 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 PRSS8Q16651 343 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 LRRC75BQ2VPJ9 315 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 FBLN7Q53RD9 439 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 SPANXN5Q5MJ07 72 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 Q8N6K4 173 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 NPBQ8NG41 125 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 OR5B3Q8NH48 314 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 SSX3Q99909 188 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 ARPC5LQ9BPX5 153 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 PLEKHA3Q9HB20 300 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 YAE1D1Q9NRH1 226 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 LYRM2Q9NU23 88 aaPredicted RBP7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 C1RLQ9NZP8 487 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 ZNF257Q9Y2Q1 563 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 STRAPQ9Y3F4 350 aaKnown RBP7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 WSB1Q9Y6I7 421 aa7.72□□□□□ -1.17
HNRNPC-220ENST00000555585 CSMD2Q7Z408 3487 aa7.71□□□□□ -1.17
HNRNPC-220ENST00000555585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.71□□□□□ -1.186e-8■■■■■ 55.1
HNRNPC-220ENST00000555585 IGSF23A1L1A6 192 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 BCL2L11O43521 198 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 CD5LO43866 347 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 NDUFA3O95167 84 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 CNIH1O95406 144 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 LY86O95711 162 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 FSHBP01225 129 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 IFNA10P01566 189 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 MAS1LP35410 378 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 RPL27AP46776 148 aaKnown RBP7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 RPP30P78346 268 aaKnown RBP7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 PRCDQ00LT1 54 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 NHLH2Q02577 135 aa7.71□□□□□ -1.18
HNRNPC-220ENST00000555585 PDLIM3Q53GG5 364 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms