RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PPP1R1AQ13522 171 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 CLEC12BQ2HXU8 276 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 C10orf55Q5SWW7 151 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 AADACL4Q5VUY2 407 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 HIST2H3AQ71DI3 136 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 COPS6Q7L5N1 327 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SLC51BQ86UW2 128 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SYCE1Q8N0S2 351 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 C9orf163Q8N9P6 203 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 OR52E4Q8NGH9 312 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 ZNF75CPQ92670 426 aaPredicted RBP0.23□□□□□ -2.37
SRP54-207ENST00000555535 GNPNAT1Q96EK6 184 aaPredicted RBP0.23□□□□□ -2.37
SRP54-207ENST00000555535 DCUN1D5Q9BTE7 237 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 SLC22A4Q9H015 551 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 ANAPC10Q9UM13 185 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 BAIAP2Q9UQB8 552 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 PXMP4Q9Y6I8 212 aa0.23□□□□□ -2.37
SRP54-207ENST00000555535 EIF4G1Q04637 1599 aaKnown RBP0.23□□□□□ -2.37
SRP54-207ENST00000555535 TAF1LQ8IZX4 1826 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 PEAK1Q9H792 1746 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 TINCRA0A1B0GVN0 87 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ERICH2A1L162 156 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ZNF879B4DU55 563 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 F8VZ95 297 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 NEMFO60524 1076 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ORM1P02763 201 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 IVLP07476 585 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 MSMBP08118 114 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 SULT1A3P0DMM9 295 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 SULT1A4P0DMN0 295 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 EVX1P49640 407 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 OR4D2P58180 307 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 SUPT4H1P63272 117 aaKnown RBP0.22□□□□□ -2.37
SRP54-207ENST00000555535 RSU1Q15404 277 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 NDUFA5Q16718 116 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ACSM3Q53FZ2 586 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 TEX36Q5VZQ5 186 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 AAED1Q7RTV5 226 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 DCXRQ7Z4W1 244 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 COMMD7Q86VX2 200 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ASB13Q8WXK3 278 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 AQP3Q92482 292 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ANKRD7Q92527 254 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 C7orf50Q9BRJ6 194 aaKnown RBP0.22□□□□□ -2.37
SRP54-207ENST00000555535 OR8D2Q9GZM6 311 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 TRABDQ9H4I3 376 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 WDR54Q9H977 334 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 GPR84Q9NQS5 396 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 OR5AC2Q9NZP5 309 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 FUT9Q9Y231 359 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 C15orf41Q9Y2V0 281 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 GMEB1Q9Y692 573 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 SMARCA4P51532 1647 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 ALPK3Q96L96 1907 aa0.22□□□□□ -2.37
SRP54-207ENST00000555535 FANCMQ8IYD8 2048 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 TONSLQ96HA7 1378 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 COL4A5P29400 1685 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SCN8AQ9UQD0 1980 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SYNRGQ9UMZ2 1314 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 IGKV1D-42A0A075B6H8 117 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 TRBV10-2A0A0K0K1G8 114 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 TEX50A0A1B0GTY4 177 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 IRGMA1A4Y4 181 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 MKRN2OSH3BPM6 223 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 LST1O00453 97 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 APOMO95445 188 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 CCL5P13501 91 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 RPS4Y1P22090 263 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 FKBP2P26885 142 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 BRS3P32247 399 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 MAP2K4P45985 399 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 BLVRAP53004 296 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 HADHBP55084 474 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 CXCR4P61073 352 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 RPS24P62847 133 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 ZNF345Q14585 488 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 ZNF846Q147U1 533 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SBSNQ6UWP8 590 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 OOSP2Q86WS3 158 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 DHFR2Q86XF0 187 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 BPIFA4PQ86YQ2 179 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 C17orf78Q8N4C9 275 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 LINC00471Q8N535 108 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 OR1M1Q8NGA1 313 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 OR5L1Q8NGL2 311 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 OR4C6Q8NH72 309 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 HAVCR2Q8TDQ0 301 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 MRPL57Q9BQC6 102 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 GINS4Q9BRT9 223 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SLC50A1Q9BRV3 221 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SPACA1Q9HBV2 294 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 FKBP14Q9NWM8 211 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 EURLQ9NYK6 297 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 DKKL1Q9UK85 242 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 TP53TG1Q9Y2A0 90 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 ZFP30Q9Y2G7 519 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 LHFPL6Q9Y693 200 aa0.21□□□□□ -2.38
SRP54-207ENST00000555535 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
SRP54-207ENST00000555535 HECW1Q76N89 1606 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms