RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 TRAV3A0A0B4J244 114 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 HAX1O00165 279 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 PRAF2O60831 178 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
CHD8-208ENST00000555301 IL5P05113 134 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 OR9G9P0C7N8 305 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 P0C879 139 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
CHD8-208ENST00000555301 SLC35B1P78383 322 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 RGS21Q2M5E4 152 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 ANKRD55Q3KP44 614 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
CHD8-208ENST00000555301 PHB2Q99623 299 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 SPIN2AQ99865 258 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 SPIN2BQ9BPZ2 258 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 LINC00527Q9UJ94 153 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 NSG2Q9Y328 171 aa11.25□□□□□ -0.61
CHD8-208ENST00000555301 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 DHFRP00374 187 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 THOC7Q6I9Y2 204 aaKnown RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 LYZL2Q7Z4W2 148 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 GPN1Q9HCN4 374 aaPredicted RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
CHD8-208ENST00000555301 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 FBXO7Q9Y3I1 522 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
CHD8-208ENST00000555301 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 OR2B8PP59922 312 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 ECSCRQ19T08 205 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 OR52B4Q8NGK2 314 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 OR1L8Q8NGR8 309 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 MDFIQ99750 246 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
CHD8-208ENST00000555301 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 WSB1Q9Y6I7 421 aa11.23□□□□□ -0.61
CHD8-208ENST00000555301 A0A0B4J293 547 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 G3V318 75 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 IFNA21P01568 189 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 OPN1MWP04001 364 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 SPNP16150 400 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 CFHR3Q02985 330 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 ATRQ13535 2644 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 IZUMO4Q1ZYL8 232 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 HSD17B13Q7Z5P4 300 aaPredicted RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 OR5AU1Q8NGC0 362 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 OR4X2Q8NGF9 303 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 WIPF2Q8TF74 440 aaPredicted RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 WFDC12Q8WWY7 111 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 FYTTD1Q96QD9 318 aaKnown RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
CHD8-208ENST00000555301 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
CHD8-208ENST00000555301 A0A1B0GU03 582 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 DBX1A6NMT0 343 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 SNRPGP15A8MWD9 76 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 IGHG4P01861 327 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 HOXB5P09067 269 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 TRAPPC2P0DI81 140 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 TRAPPC2BP0DI82 140 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 SLC25A6P12236 298 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 MYOD1P15172 320 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
CHD8-208ENST00000555301 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 AARDQ4LEZ3 155 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 C19orf54Q5BKX5 351 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 Q6ZRM9 215 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
CHD8-208ENST00000555301 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms