RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ID3Q02535 119 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 Q6YL49 198 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 OR2T10Q8NGZ9 312 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 POMT1Q9Y6A1 747 aa8.57□□□□□ -1.04
TDP1-211ENST00000555178 A0A1B0GW64 132 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 MSGN1A6NI15 193 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 NCBP2LA6PVI3 153 aaKnown RBP8.56□□□□□ -1.04
TDP1-211ENST00000555178 NBR2O15453 112 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 ARPC5O15511 151 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 DEDDO75618 318 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 AMY1AP04745 511 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 LGALS7P47929 136 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 TNFRSF9Q07011 255 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 EBI3Q14213 229 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 LRRC75BQ2VPJ9 315 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 DCUN1D4Q92564 292 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 RBKSQ9H477 322 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.56□□□□□ -1.04
TDP1-211ENST00000555178 TMEM14BQ9NUH8 114 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 TMEM160Q9NX00 188 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 COA4Q9NYJ1 87 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 HSPB7Q9UBY9 170 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 WRBO00258 174 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 RRHO14718 337 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 IFNA17P01571 189 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 FAM106CPP0CH98 169 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 APELAP0DMC3 54 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 BRS3P32247 399 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 GNB1P62873 340 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 TMEM167AQ8TBQ9 72 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 ASB13Q8WXK3 278 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 TSNAXQ99598 290 aaKnown RBP8.56□□□□□ -1.04
TDP1-211ENST00000555178 HINT2Q9BX68 163 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 PRDM13Q9H4Q3 707 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 C11orf1Q9H5F2 150 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 FOXA2Q9Y261 457 aaPredicted RBP8.56□□□□□ -1.04
TDP1-211ENST00000555178 OR51B2Q9Y5P1 312 aa8.56□□□□□ -1.04
TDP1-211ENST00000555178 A6NDX4 124 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 CGB1A6NKQ9 187 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 SNAPC5O75971 98 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 NDUFA3O95167 84 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 SRD5A1P18405 259 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 CXCL2P19875 107 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 ARHGDIBP52566 201 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 AP2S1P53680 142 aaPredicted RBP8.55□□□□□ -1.04
TDP1-211ENST00000555178 PAX9P55771 341 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
TDP1-211ENST00000555178 PLGLAQ15195 96 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 PRSS54Q6PEW0 395 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 THNSL2Q86YJ6 484 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 OR10W1Q8NGF6 305 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 THAP6Q8TBB0 222 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 TCF19Q9Y242 345 aa8.55□□□□□ -1.04
TDP1-211ENST00000555178 PIGBOS1A0A0B4J2F0 54 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 TEX50A0A1B0GTY4 177 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 RNF222A6NCQ9 220 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 SYNGR2O43760 224 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 CA2P00918 260 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 PRSS8Q16651 343 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 AARDQ4LEZ3 155 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 Q8N9W7 124 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 NPBQ8NG41 125 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 DYNLT3P51808 116 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 BPIFB3P59826 476 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 BLCAPP62952 87 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 NDPQ00604 133 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 FGL1Q08830 312 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 TNXAQ16473 311 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 C5orf64Q2M2E5 130 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 ZNF546Q86UE3 836 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 ZNF429Q86V71 674 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 C9orf62Q8N4C0 152 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 TEX45Q8NA69 505 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 BSCL2Q96G97 398 aaPredicted RBP8.54□□□□□ -1.04
TDP1-211ENST00000555178 FAM103A1Q9BTL3 118 aaKnown RBP8.54□□□□□ -1.04
TDP1-211ENST00000555178 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
TDP1-211ENST00000555178 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 FAM24AA6NFZ4 105 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 CEBPZOSA8MTT3 80 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 CRLF1O75462 422 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 SPDEFO95238 335 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 SLC25A4P12235 298 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 LYL1P12980 280 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
TDP1-211ENST00000555178 DTD1Q8TEA8 209 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 HYLS1Q96M11 299 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 RNF5Q99942 180 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 HSPB9Q9BQS6 159 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 AIFM2Q9BRQ8 373 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms