RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TRGV3P03979 118 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 HLA-GP17693 338 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 CD33P20138 364 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 S100A5P33763 92 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 MYCNOSP40205 109 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 RPL27AP46776 148 aaKnown RBP9.56□□□□□ -0.88
SYNE2-214ENST00000554928 TPPP2P59282 170 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 RND3P61587 244 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 RPL8P62917 257 aaKnown RBP9.56□□□□□ -0.88
SYNE2-214ENST00000554928 MEF2DQ14814 521 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 SP6Q3SY56 376 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 LPCAT3Q6P1A2 487 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 Q8N402 240 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 DMBX1Q8NFW5 382 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 VSTM2AQ8TAG5 236 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 BORCS5Q969J3 196 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 FYTTD1Q96QD9 318 aaKnown RBP9.56□□□□□ -0.88
SYNE2-214ENST00000554928 C5orf66Q9H5L9 145 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 ZNF355PQ9NSJ1 428 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 COA4Q9NYJ1 87 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 COMMD9Q9P000 198 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 VSIG4Q9Y279 399 aa9.56□□□□□ -0.88
SYNE2-214ENST00000554928 PRKDCP78527 4128 aaKnown RBP9.55□□□□□ -0.88
SYNE2-214ENST00000554928 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 A0A087WW49 117 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 A6NHS1 94 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 DISC1C4P0D8 188 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 ACTL6BO94805 426 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 REG1AP05451 166 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 CTSDP07339 412 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-214ENST00000554928 ETV6P41212 452 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 RAB25P57735 213 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 OR2B8PP59922 312 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 DEFA6Q01524 100 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 FHL3Q13643 280 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 BAK1Q16611 211 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 BEAN1Q3B7T3 259 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 CD300LFQ8TDQ1 290 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 SEC22AQ96IW7 307 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 NDUFA13Q9P0J0 144 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 GPR132Q9UNW8 380 aa9.55□□□□□ -0.88
SYNE2-214ENST00000554928 IGKV1-5P01602 117 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 LGALS1P09382 135 aaKnown RBP9.54□□□□□ -0.88
SYNE2-214ENST00000554928 SLURP1P55000 103 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 RUNX1Q01196 453 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 TTC9CQ8N5M4 171 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 OR10W1Q8NGF6 305 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 OR4A5Q8NH83 315 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 TMEM230Q96A57 120 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 ZNF486Q96H40 463 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-214ENST00000554928 SPIN2AQ99865 258 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 SPIN2BQ9BPZ2 258 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 MCUBQ9NWR8 336 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 PRR13Q9NZ81 148 aa9.54□□□□□ -0.88
SYNE2-214ENST00000554928 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 TEX50A0A1B0GTY4 177 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 IGLC7A0M8Q6 106 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 H0Y980 276 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 CREBL2O60519 120 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-214ENST00000554928 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
SYNE2-214ENST00000554928 SLC6A1P30531 599 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 MAS1LP35410 378 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 ERVK-16P61578 105 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 LHFPL5Q8TAF8 219 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 ZFAND1Q8TCF1 268 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 TMEM68Q96MH6 324 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 SLA2Q9H6Q3 261 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 AKIP1Q9NQ31 210 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 SLC2A8Q9NY64 477 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 DMRT1Q9Y5R6 373 aa9.53□□□□□ -0.88
SYNE2-214ENST00000554928 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 ANKRD34BA5PLL1 514 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 H3BUA1 57 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 OR2J3O76001 311 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 OR5AC1P0C628 307 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 P0C879 139 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-214ENST00000554928 KRTAP10-11P60412 298 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 RHOGP84095 191 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 SPANXN2Q5MJ10 180 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 KPRPQ5T749 579 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-214ENST00000554928 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 DCUN1D4Q92564 292 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 PRRT1Q99946 306 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 FAM212BQ9NTI7 297 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-214ENST00000554928 S4R3C0 116 aa9.52□□□□□ -0.89
SYNE2-214ENST00000554928 LINC00854A0A1B0GVQ3 168 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 CRYM-AS1A6NIL9 109 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 NPIPB5A8MRT5 1133 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 NDUFB8O95169 186 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 BRI3O95415 125 aa9.51□□□□□ -0.89
SYNE2-214ENST00000554928 SERPINE2P07093 398 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms