RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 OR2W1Q9Y3N9 320 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 ATP23Q9Y6H3 246 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 PCBD1P61457 104 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 CHRDL1Q9BU40 450 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 C1QTNF5Q9BXJ0 243 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 PMS2P5A8MQ11 134 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 HSPB6O14558 160 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 MT-CO2P00403 227 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 CGAP01215 116 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 APCSP02743 223 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 GDF1P27539 372 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 SAP25Q8TEE9 199 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 EAF1Q96JC9 268 aaPredicted RBP13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A18PA6NE21 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 OR4C46A6NHA9 309 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 HLA-DRB1P01911 266 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 OTX2P32243 289 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 PCSK4Q6UW60 755 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
SYNE3-203ENST00000554873 C7orf71A4D174 169 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 HAND1O96004 215 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 IGHV3-9P01782 118 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 OR10J4P0C629 311 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 CRYBB3P26998 211 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
SYNE3-203ENST00000554873 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
SYNE3-203ENST00000554873 IL11RAQ14626 422 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 TMEM70Q9BUB7 260 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 FREM1Q5H8C1 2179 aa13.04□□□□□ -0.32
SYNE3-203ENST00000554873 SMIM17P0DL12 118 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 GPM6AP51674 278 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 MTCH1Q9NZJ7 389 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 PPIAL4CA0A0B4J2A2 164 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 FAM231BA6NCW3 169 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 K7ESF4 209 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 CCL4P13236 92 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 CD1BP29016 333 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 REG1BP48304 166 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 FGF12P61328 243 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 WIPI1Q5MNZ9 446 aaPredicted RBP13.03□□□□□ -0.32
SYNE3-203ENST00000554873 MRPL54Q6P161 138 aaKnown RBP13.03□□□□□ -0.32
SYNE3-203ENST00000554873 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 C22orf46C9J442 243 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 TRAPPC2LH3BP13 241 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 M0R296 226 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 ARL14EPLP0DKL9 152 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 CCNOP22674 350 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
SYNE3-203ENST00000554873 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 AZU1P20160 251 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 SLC35B1P78383 322 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 C11orf52Q96A22 123 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 OR2D2Q9H210 308 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 LIN7CQ9NUP9 197 aaKnown RBP13.02□□□□□ -0.33
SYNE3-203ENST00000554873 CXorf1O96002 111 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 P04436 131 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 CCL2P13500 99 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 Q8N7P7 452 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 OR10W1Q8NGF6 305 aa13.02□□□□□ -0.33
SYNE3-203ENST00000554873 FNDC4Q9H6D8 234 aaPredicted RBP13.02□□□□□ -0.33
SYNE3-203ENST00000554873 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms