RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MPV17L2Q567V2 206 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 GCSAMLQ5JQS6 135 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CLEC12AQ5QGZ9 265 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 LDLRAD2Q5SZI1 272 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ZFP1Q6P2D0 407 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SLC16A13Q7RTY0 426 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MTERF4Q7Z6M4 381 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SYCE1Q8N0S2 351 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF561Q8N587 486 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF709Q8N972 641 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C8orf31Q8N9H6 132 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NECAP1Q8NC96 275 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 OR4A15Q8NGL6 344 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RPS4Y2Q8TD47 263 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CDKL2Q92772 493 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MAL2Q969L2 176 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 LINC00477Q96M19 166 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 OPALINQ96PE5 141 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 GPR22Q99680 433 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RNF5Q99942 180 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 WFDC6Q9BQY6 131 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ADAT1Q9BUB4 502 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C19orf12Q9NSK7 152 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ACER3Q9NUN7 267 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM38BQ9NVV0 291 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 DNAJC27Q9NZQ0 273 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MARCOQ9UEW3 520 aaPredicted RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 POLR1DQ9Y2S0 133 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ACOT9Q9Y305 439 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 FAT2Q9NYQ8 4349 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 DSPPQ9NZW4 1301 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TRAV6A0A075B6T7 132 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 A0A087WUJ7 227 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SMIM26A0A096LP01 95 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 EXOC1LA0A1B0GW35 172 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM120BA0PK00 339 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NUPR2A6NF83 97 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SMIM23A6NLE4 172 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CPSF4LA6NMK7 179 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 COLCA2A8K830 154 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 KRBOX1C9JBD0 128 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 FTCDNL1E5RQL4 147 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 F5H5K5 113 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CDIPTO14735 213 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RER1O15258 196 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NDUFB3O43676 98 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SMIM24O75264 130 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RBBP9O75884 186 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SNAP29O95721 258 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RPS17P08708 135 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 KRT16P08779 473 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CD7P09564 240 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 PGA4P0DJD7 388 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 PGA3P0DJD8 388 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 PGA5P0DJD9 388 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 INAFM2P0DMQ5 153 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CD37P11049 281 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 MLNP12872 115 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 PFN2P35080 140 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TALDO1P37837 337 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ASIPP42127 132 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SRP9P49458 86 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RGS6P49758 472 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SERPINB8P50452 374 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RAB7AP51149 207 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 HADHBP55084 474 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 OR12D2P58182 307 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TAS2R31P59538 309 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TAS2R46P59540 309 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CDK5Q00535 292 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 OR8G1Q15617 311 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 Q5VSD8 79 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 AP1ARQ63HQ0 302 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 HCP5Q6MZN7 132 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C3orf62Q6ZUJ4 267 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35D2Q76EJ3 337 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 NAA40Q86UY6 237 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 APRG1Q8IVJ8 170 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C20orf196Q8IYI0 205 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 VKORC1L1Q8N0U8 176 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ARRDC1Q8N5I2 433 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 DEFB125Q8N687 156 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RNF182Q8N6D2 247 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ASCC1Q8N9N2 400 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 OR8S1Q8NH09 359 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 CIRBP-AS1Q8TBR5 109 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 DEDD2Q8WXF8 326 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 TNFRSF14Q92956 283 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 LEAP2Q969E1 77 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RPEQ96AT9 228 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 ROPN1LQ96C74 230 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 STACQ99469 402 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 RSG1Q9BU20 258 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SCRT1Q9BWW7 348 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 GGTLC1Q9BX51 225 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 LINC00470Q9BZP3 86 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 SLIRPQ9GZT3 109 aaKnown RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 FGF23Q9GZV9 251 aaPredicted RBP0.86□□□□□ -2.27
PRPF39-208ENST00000554785 C1orf198Q9H425 327 aa0.86□□□□□ -2.27
PRPF39-208ENST00000554785 METTL8Q9H825 291 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms