RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 DOCK11Q5JSL3 2073 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 DNAH6Q9C0G6 4158 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 C13orf42A0A1B0GVH6 325 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 FBLL1A6NHQ2 334 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SHISA9B4DS77 424 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 K7EP13 123 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR7C2O60412 319 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 GYPAP02724 150 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 NUTF2P61970 127 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 RHOGP84095 191 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 HLA-DRB5Q30154 266 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TMEM155Q4W5P6 130 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 PATE2Q6UY27 113 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SHISA6Q6ZSJ9 500 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TEX45Q8NA69 505 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 QTRT1Q9BXR0 403 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 GAR1Q9NY12 217 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TRGV5A0A0B4J1U4 118 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 C5orf49A4QMS7 147 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 C2orf70A6NJV1 201 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 C17orf112F2Z3M2 114 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 M0R296 226 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ARL4DP49703 201 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 HSPE1P61604 102 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 RAB11AP62491 216 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TLE1Q04724 770 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SRSF6Q13247 344 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 MMDQ15546 238 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ABCA11PQ4W5N1 156 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 CARD17Q5XLA6 110 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 DHRS13Q6UX07 377 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 Q8NA96 180 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TMEM178AQ8NBL3 297 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR4F17Q8NGA8 305 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 FAM57AQ8TBR7 257 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 GALMQ96C23 342 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 SFRP2Q96HF1 295 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 THOC3Q96J01 351 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 EAF1Q96JC9 268 aaPredicted RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 UHRF2Q96PU4 802 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 OR4F4Q96R69 305 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 NDFIP1Q9BT67 221 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ZNF665Q9H7R5 613 aa2.77□□□□□ -1.97
SEC23A-207ENST00000554615 ERRFI1Q9UJM3 462 aaPredicted RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 LSM5Q9Y4Y9 91 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 PRKDCP78527 4128 aaKnown RBP2.77□□□□□ -1.97
SEC23A-207ENST00000554615 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 IGLC7A0M8Q6 106 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 NXPH4O95158 308 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 IGHG4P01861 327 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 LINC00614P0C842 121 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 IGLC2P0DOY2 106 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 IGFBP2P18065 325 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 GCHFRP30047 84 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 ZNF83P51522 516 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RPP30P78346 268 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 DEFA5Q01523 94 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 MRPL49Q13405 166 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 SMIM21Q3B7S5 101 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 ALKBH6Q3KRA9 238 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 PHLDA2Q53GA4 152 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 SPRNQ5BIV9 151 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 PDZD11Q5EBL8 140 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 FAM209BQ5JX69 171 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 SPINK14Q6IE38 97 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 FAM24BQ8N5W8 94 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RBMXL3Q8N7X1 1067 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 TMEM75Q8N9X5 138 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 TCEAL3Q969E4 200 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 SLC25A33Q9BSK2 321 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 TREM1Q9NP99 234 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 FKBP11Q9NYL4 201 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 PRNDQ9UKY0 176 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 LAMA1P25391 3075 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 TRBV23-1A0A0A0MS06 115 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 VWC2LB2RUY7 222 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 I3L2K1 104 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 K7EM74 188 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 NPY1RP25929 384 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 OR10J1P30954 320 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 ERVFC1-1P60608 527 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RUNX1Q01196 453 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RBPJQ06330 500 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 CD69Q07108 199 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 CATR1Q13166 79 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RSPO4Q2I0M5 234 aaPredicted RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 KRTCAP3Q53RY4 240 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 UTF1Q5T230 341 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 GDF5OSQ5U4N7 250 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 FIP1L1Q6UN15 594 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 MRPL21Q7Z2W9 205 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 SGMS2Q8NHU3 365 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 MRPL53Q96EL3 112 aaKnown RBP2.76□□□□□ -1.97
SEC23A-207ENST00000554615 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 HES7Q9BYE0 225 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 MS4A5Q9H3V2 200 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 NPVFQ9HCQ7 196 aa2.76□□□□□ -1.97
SEC23A-207ENST00000554615 MRPS16Q9Y3D3 137 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms