RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 C5orf64Q2M2E5 130 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 ZNF546Q86UE3 836 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 PPP1R27Q86WC6 154 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 MRPL41Q8IXM3 137 aaKnown RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 INO80EQ8NBZ0 244 aaPredicted RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 OR1L8Q8NGR8 309 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 DCUN1D4Q92564 292 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 RITA1Q96K30 269 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 AQP10Q96PS8 301 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 CLCC1Q96S66 551 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 COMMD5Q9GZQ3 224 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 C11orf1Q9H5F2 150 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 ZNF430Q9H8G1 570 aaPredicted RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 LYRM2Q9NU23 88 aaPredicted RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 METTL1Q9UBP6 276 aaKnown RBP6.12□□□□□ -1.43
TDP1-209ENST00000554180 TNFSF18Q9UNG2 199 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 TCF19Q9Y242 345 aa6.12□□□□□ -1.43
TDP1-209ENST00000554180 MTORP42345 2549 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 SETXQ7Z333 2677 aaKnown RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 A0A0D9SG52 128 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 A0A1W2PN81 502 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 CEBPZOSA8MTT3 80 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 INS-IGF2F8WCM5 200 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 M0QZK8 103 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 ARPC5O15511 151 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 FGF16O43320 207 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 CHST1O43916 411 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 ACTL6BO94805 426 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 SCAF4O95104 1147 aaKnown RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 IFNA17P01571 189 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 C4BPBP20851 252 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 CHRNA7P36544 502 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 COMPP49747 757 aaPredicted RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 ATP5IP56385 69 aaPredicted RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 RPL23AP62750 156 aaKnown RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 PRCDQ00LT1 54 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 PLGLAQ15195 96 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 TUSC1Q2TAM9 212 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 ACOT7LQ6ZUV0 252 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 C16orf82Q7Z2V1 217 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 C9orf62Q8N4C0 152 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 OR5R1Q8NH85 324 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 DTD1Q8TEA8 209 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 SMIM8Q96KF7 97 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 SSX3Q99909 188 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 SRSF8Q9BRL6 282 aaKnown RBP6.11□□□□□ -1.43
TDP1-209ENST00000554180 MFFQ9GZY8 342 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 MAGT1Q9H0U3 335 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 FBXL15Q9H469 300 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 RBKSQ9H477 322 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 PRDM13Q9H4Q3 707 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 PLSCR3Q9NRY6 295 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 OR5AC2Q9NZP5 309 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 OR51B2Q9Y5P1 312 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 TNCP24821 2201 aa6.11□□□□□ -1.43
TDP1-209ENST00000554180 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 SVEP1Q4LDE5 3571 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 TEX50A0A1B0GTY4 177 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 RNF222A6NCQ9 220 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 BTBD17A6NE02 478 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 NXPH3O95157 252 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 TMEM50AO95807 157 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 HLA-DRB1P01911 266 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 CD24P25063 80 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 PAX6P26367 422 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 CNTFRP26992 372 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 RPL12P30050 165 aaKnown RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 VDAC2P45880 294 aaPredicted RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 HOXA1P49639 335 aaPredicted RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 NKX2-5P52952 324 aaPredicted RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 F2RL1P55085 397 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 RPP30P78346 268 aaKnown RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 BAXQ07812 192 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 HNF4GQ14541 408 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 MRGPRG-AS1Q2M3A8 158 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 DEFB112Q30KQ8 113 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 FAM120AOSQ5T036 256 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 LAMTOR1Q6IAA8 161 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 HSD17B13Q7Z5P4 300 aaPredicted RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 OR2C3Q8N628 320 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 GRPEL2Q8TAA5 225 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 PIFOQ8TCI5 191 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 SSMEM1Q8WWF3 244 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 RBM14Q96PK6 669 aaKnown RBP6.1□□□□□ -1.43
TDP1-209ENST00000554180 TMUB1Q9BVT8 246 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 SLC25A31Q9H0C2 315 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 HIPK2Q9H2X6 1198 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 PLEKHA3Q9HB20 300 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 ENY2Q9NPA8 101 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 NDUFA4L2Q9NRX3 87 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 MOB4Q9Y3A3 225 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 U3KQ87 197 aa6.1□□□□□ -1.43
TDP1-209ENST00000554180 CELSR1Q9NYQ6 3014 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 A6NDX4 124 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 H3BUX3 64 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 CA2P00918 260 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 HKR1P10072 659 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms