RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FAM214BQ7L5A3 538 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 C1orf174Q8IYL3 243 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 C9orf106Q8NAJ2 232 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.78
SHMT2-207ENST00000553837 BOD1L1Q8NFC6 3051 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 WNT9BO14905 357 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 TNFSF4P23510 183 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 CTRLP40313 264 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 KIR2DL2P43627 348 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-207ENST00000553837 GNB1P62873 340 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 NHLH1Q02575 133 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 FOXF2Q12947 444 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF826PQ6ZT77 177 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 CXorf67Q86X51 503 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-207ENST00000553837 CNEP1R1Q8N9A8 125 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 WDR31Q8NA23 367 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 TXN2Q99757 166 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 TMEM147Q9BVK8 224 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 MRPL18Q9H0U6 180 aaKnown RBP10.2□□□□□ -0.78
SHMT2-207ENST00000553837 BET1LQ9NYM9 111 aa10.2□□□□□ -0.78
SHMT2-207ENST00000553837 PSPNO60542 156 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 IGKV1-5P01602 117 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 C1QTNF9P0C862 333 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
SHMT2-207ENST00000553837 Q6ZN92 141 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 Q6ZT83 130 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 C11orf53Q8IXP5 236 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 KLF14Q8TD94 323 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-207ENST00000553837 KCNIP2Q9NS61 270 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 PPP1R3CQ9UQK1 317 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 IQCF6A8MYZ5 107 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 NPIPB11E5RHQ5 1161 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 NDUFB4O95168 129 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 KRTDAPP60985 99 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF90Q03938 601 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF146Q15072 292 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 SMIM21Q3B7S5 101 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 KLHDC1Q8N7A1 406 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 FAM216AQ8WUB2 273 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 PPIAL4AQ9Y536 164 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 NBEAQ8NFP9 2946 aa10.19□□□□□ -0.78
SHMT2-207ENST00000553837 J3QW42 95 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 CLDN1O95832 211 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 GPX1P07203 203 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 IGLC2P0DOY2 106 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 TGFBR3Q03167 851 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF585BQ52M93 769 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 IGFL2Q6UWQ7 119 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 OR10G8Q8NGN5 311 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
SHMT2-207ENST00000553837 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 TRAPPC2LQ9UL33 140 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 FZR1Q9UM11 496 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 C17orf112F2Z3M2 114 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 HYPMO75409 117 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 CBLN1P23435 193 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-207ENST00000553837 Q6ZR03 302 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 STARD4Q96DR4 205 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 MRPL27Q9P0M9 148 aaKnown RBP10.18□□□□□ -0.78
SHMT2-207ENST00000553837 POLDIP2Q9Y2S7 368 aa10.18□□□□□ -0.78
SHMT2-207ENST00000553837 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
SHMT2-207ENST00000553837 HAND1O96004 215 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 IGKV3-15P01624 115 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 CRYAAP02489 173 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 PLA2G5P39877 138 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 Q8IYB0 196 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 Q8N976 141 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 C5orf30Q96GV9 206 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 FAM103A1Q9BTL3 118 aaKnown RBP10.17□□□□□ -0.78
SHMT2-207ENST00000553837 HES4Q9HCC6 221 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
SHMT2-207ENST00000553837 FCN1O00602 326 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 RBFOX2O43251 390 aaKnown RBP eCLIP10.16□□□□□ -0.785e-15■■■■■ 33.3
SHMT2-207ENST00000553837 EGR1P18146 543 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TIMP3P35625 211 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 PRAMEF6Q5VXH4 476 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TCTEX1D1Q8N7M0 179 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 OR1L1Q8NH94 360 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 NPCDR1Q9BY65 106 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 OBP2BQ9NPH6 170 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TUBG2Q9NRH3 451 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
SHMT2-207ENST00000553837 RNF24Q9Y225 148 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 SH2D1BO14796 132 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 ZNF253O75346 499 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 CECR9P0C854 216 aa10.16□□□□□ -0.78
SHMT2-207ENST00000553837 MOB1BQ7L9L4 216 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms