RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MAS1LP35410 378 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 DYNLT3P51808 116 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 RPL23AP62750 156 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 VAMP2P63027 116 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 KLRD1Q13241 179 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 SSX2Q16385 188 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 AANATQ16613 207 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 POU2AF1Q16633 256 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 HCP5Q6MZN7 132 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 WFDC11Q8NEX6 87 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 OR11H7Q8NGC8 314 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 OR8H1Q8NGG4 311 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 OR52E5Q8NH55 327 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 GPR146Q96CH1 333 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 SEC22AQ96IW7 307 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 ST6GAL2Q96JF0 529 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 RBM14Q96PK6 669 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 CIB3Q96Q77 187 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 FYTTD1Q96QD9 318 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 CHIAQ9BZP6 476 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 HIPK2Q9H2X6 1198 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 RANGRFQ9HD47 186 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-202ENST00000553619 ENY2Q9NPA8 101 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 BET1LQ9NYM9 111 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 PITPNC1Q9UKF7 332 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 NUP50Q9UKX7 468 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 PRNDQ9UKY0 176 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
VTI1B-202ENST00000553619 A0A0D9SG52 128 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 A0A1W2PRD5 423 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 A0A1W2PRF3 423 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 A0A1W2PRM7 423 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 BTBD17A6NE02 478 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 HMSDA8MTL9 139 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 E5RGE8 158 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 UPK2O00526 184 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 CCSO14618 274 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 CD5LO43866 347 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 GPR137BO60478 399 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 RAMP3O60896 148 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ACTL6BO94805 426 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 KBTBD11O94819 623 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 S1PR2O95136 353 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SPDEFO95238 335 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 IFNA17P01571 189 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SLC25A4P12235 298 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 CXCL3P19876 107 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SAA4P35542 130 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 G6PCP35575 357 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 REG1BP48304 166 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 COMPP49747 757 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ATP5IP56385 69 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-202ENST00000553619 BRWD1-AS2P59051 145 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SPCS3P61009 180 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 UBE2KP61086 200 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 EBI3Q14213 229 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 HES1Q14469 280 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 HABP2Q14520 560 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-202ENST00000553619 PLGLAQ15195 96 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 C2orf68Q2NKX9 166 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ZFP69Q49AA0 526 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 NMSQ5H8A3 153 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF600Q6ZNG1 722 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SSX9Q7RTT3 188 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 LHFPL4Q7Z7J7 247 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 NOXA1Q86UR1 476 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF429Q86V71 674 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 PRIMA1Q86XR5 153 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 STX12Q86Y82 276 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 FOXRED2Q8IWF2 684 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 PDZD9Q8IXQ8 264 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 MMD2Q8IY49 270 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 INO80EQ8NBZ0 244 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-202ENST00000553619 NPBQ8NG41 125 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 OR4D5Q8NGN0 318 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 OR2T35Q8NGX2 323 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 LHFPL5Q8TAF8 219 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 NTN5Q8WTR8 489 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-202ENST00000553619 PPP1R1CQ8WVI7 109 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 C5orf30Q96GV9 206 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 OR10C1Q96KK4 312 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 HARBI1Q96MB7 349 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 RAB40CQ96S21 281 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 SLC25A31Q9H0C2 315 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 TMEM160Q9NX00 188 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 ZNF257Q9Y2Q1 563 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 NSG2Q9Y328 171 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 POMT1Q9Y6A1 747 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 CR1P17927 2039 aa4.02□□□□□ -1.77
VTI1B-202ENST00000553619 CFAP46Q8IYW2 2715 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 GCN1Q92616 2671 aaKnown RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 USP9YO00507 2555 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-202ENST00000553619 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
VTI1B-202ENST00000553619 A0A1W2PN81 502 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms