RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TTC9CQ8N5M4 171 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 OR6F1Q8NGZ6 308 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 MCFD2Q8NI22 146 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 VSTM2AQ8TAG5 236 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 TMEM167AQ8TBQ9 72 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 FCAMRQ8WWV6 532 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 OR2A7Q96R45 310 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 PHB2Q99623 299 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 SPIN2AQ99865 258 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 SPIN2BQ9BPZ2 258 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 COA4Q9NYJ1 87 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 CEPT1Q9Y6K0 416 aa8.98□□□□□ -0.97
SRP54-203ENST00000553544 E7EUB6 86 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 GABARAPH6UMI1 98 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 RBFOX2O43251 390 aaKnown RBP eCLIP8.97□□□□□ -0.97
SRP54-203ENST00000553544 KBTBD11O94819 623 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 ZP3P21754 424 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 ZNF45Q02386 682 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
SRP54-203ENST00000553544 IL18Q14116 193 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 C10orf55Q5SWW7 151 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 LAX1Q8IWV1 398 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 CD300LFQ8TDQ1 290 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 SLC5A7Q9GZV3 580 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 HIPK2Q9H2X6 1198 aa8.97□□□□□ -0.97
SRP54-203ENST00000553544 A0A1B0GW64 132 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 ANKRD34BA5PLL1 514 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 TEX22C9J3V5 150 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 CTDSPLO15194 276 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 TNFSF12O43508 249 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 ACTL6BO94805 426 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 LY6G6CO95867 125 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 HRASP01112 189 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 IL6RP08887 468 aaPredicted RBP8.96□□□□□ -0.98
SRP54-203ENST00000553544 ZNF735P0CB33 412 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 GNRHRP30968 328 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 HRH1P35367 487 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 MAS1LP35410 378 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 RFX2P48378 723 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 TAS2R19P59542 299 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 FXYD4P59646 89 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 DEFA5Q01523 94 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 POU2AF1Q16633 256 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 KLK9Q2XQG4 91 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 RNASE10Q5GAN6 216 aaKnown RBP8.96□□□□□ -0.98
SRP54-203ENST00000553544 ZNF818PQ6ZRF7 136 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 LYSMD2Q8IV50 215 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 SPAG16Q8N0X2 631 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 ARRDC1Q8N5I2 433 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 MOB3AQ96BX8 217 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 BET1LQ9NYM9 111 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 PEF1Q9UBV8 284 aaKnown RBP8.96□□□□□ -0.98
SRP54-203ENST00000553544 MTFP1Q9UDX5 166 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 KLK9Q9UKQ9 250 aa8.96□□□□□ -0.98
SRP54-203ENST00000553544 HMX3A6NHT5 357 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 FAM223BA6NKX1 122 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 MPPED1O15442 326 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 HPRT1P00492 218 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 TRBV12-3P01733 135 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 PMP2P02689 132 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 PRH1P02810 166 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 CRYGCP07315 174 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 HLA-DMAP28067 261 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 RPL27AP46776 148 aaKnown RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 TAS2R31P59538 309 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 MEF2DQ14814 521 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 TATDN3Q17R31 274 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 IL34Q6ZMJ4 242 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 LINC00322Q6ZN03 302 aaPredicted RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 FAM223AQ8IWN6 122 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 OR9G4Q8NGQ1 327 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 OR4A5Q8NH83 315 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 SMIM4Q8WVI0 70 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 ZNF2Q9BSG1 426 aaPredicted RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 SLIRPQ9GZT3 109 aaKnown RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 NXF2Q9GZY0 626 aaKnown RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 RETNQ9HD89 108 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 AKIP1Q9NQ31 210 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 SLC2A9Q9NRM0 540 aa8.95□□□□□ -0.98
SRP54-203ENST00000553544 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
SRP54-203ENST00000553544 FABP12A6NFH5 140 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 CGB1A6NKQ9 187 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 NPIPB5A8MRT5 1133 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 CTDSP2O14595 271 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 PTBP1P26599 531 aaKnown RBP eCLIP8.94□□□□□ -0.98
SRP54-203ENST00000553544 AP3S2P59780 193 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 RPL8P62917 257 aaKnown RBP8.94□□□□□ -0.98
SRP54-203ENST00000553544 RHOGP84095 191 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 AADACL3Q5VUY0 350 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 OR4A47Q6IF82 309 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 LCN12Q6JVE5 192 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 SSX9Q7RTT3 188 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 SLC25A42Q86VD7 318 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 SLC38A6Q8IZM9 456 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 Q8N402 240 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 TMEM229BQ8NBD8 167 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 NECAP1Q8NC96 275 aa8.94□□□□□ -0.98
SRP54-203ENST00000553544 ZNF486Q96H40 463 aaPredicted RBP8.94□□□□□ -0.98
SRP54-203ENST00000553544 FAM110AQ9BQ89 295 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms