RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CTRB1P17538 263 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 G6PCP35575 357 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 KIR2DS2P43631 304 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 LPAR6P43657 344 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 MSMO1Q15800 293 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 CTRB2Q6GPI1 263 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 VSTM2AQ8TAG5 236 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 WWC2-AS2Q96NR7 200 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 THAP7Q9BT49 309 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-206ENST00000553529 WFDC10AQ9H1F0 79 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 ZNF257Q9Y2Q1 563 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 IGHV3-21A0A0B4J1V1 117 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 IGHV3-35A0A0C4DH35 117 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-206ENST00000553529 HPRT1P00492 218 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 CRYGCP07315 174 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 CATR1Q13166 79 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 ZBTB34Q8NCN2 500 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 DMBX1Q8NFW5 382 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 RYR3Q15413 4870 aa13.81□□□□□ -0.2
SHMT2-206ENST00000553529 IGLV11-55A0A075B6I3 123 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 FAM25AB3EWG3 89 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 FAM25CB3EWG5 89 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 FAM25GB3EWG6 89 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 RBFOX2O43251 390 aaKnown RBP eCLIP13.8□□□□□ -0.25e-15■■■■■ 33.3
SHMT2-206ENST00000553529 APOA1P02647 267 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 MFAP2P55001 183 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 TAS2R31P59538 309 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
SHMT2-206ENST00000553529 SPCS2Q15005 226 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
SHMT2-206ENST00000553529 MIXL1Q9H2W2 232 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 KLK11Q9UBX7 282 aa13.8□□□□□ -0.2
SHMT2-206ENST00000553529 TEX50A0A1B0GTY4 177 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 TMEM127O75204 238 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 KRASP01116 189 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 IGKV1-39P01597 117 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 IGKV1D-39P04432 117 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 NQO2P16083 231 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 PI3P19957 117 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 MAS1LP35410 378 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 MECP2P51608 486 aaKnown RBP13.79□□□□□ -0.2
SHMT2-206ENST00000553529 WT1-ASQ06250 92 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-206ENST00000553529 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
SHMT2-206ENST00000553529 MARCH11A6NNE9 402 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 NHLRC4P0CG21 123 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-206ENST00000553529 RORCP51449 518 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 TAS2R46P59540 309 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 UNQ9165/PRO28630Q6UXU0 137 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 OR52I2Q8NH67 350 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 OR4A5Q8NH83 315 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
SHMT2-206ENST00000553529 ABHD1Q96SE0 405 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 HINT2Q9BX68 163 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 PLEKHA2Q9HB19 425 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 RETNQ9HD89 108 aa13.78□□□□□ -0.2
SHMT2-206ENST00000553529 C2orf70A6NJV1 201 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 GPR31O00270 319 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 CD7P09564 240 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 F2RP25116 425 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 ARL3P36405 182 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 ALDH3B2P48448 385 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 FAAP20Q6NZ36 180 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 TBC1D26Q86UD7 250 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 OR6F1Q8NGZ6 308 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 WDR89Q96FK6 387 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-206ENST00000553529 PLEKHA3Q9HB20 300 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 C19orf73Q9NVV2 129 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
SHMT2-206ENST00000553529 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
SHMT2-206ENST00000553529 TENM3Q9P273 2699 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 DEFA4P12838 97 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 GPR183P32249 361 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 TSPAN5P62079 268 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 SLC25A42Q86VD7 318 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 LAX1Q8IWV1 398 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 COMMD5Q9GZQ3 224 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
SHMT2-206ENST00000553529 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 SMIM31A0A1B0GVY4 71 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 TMEM213A2RRL7 107 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 CTDSP2O14595 271 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 CD3DP04234 171 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 OR13C7P0DN81 318 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 FOLR2P14207 255 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 RCVRNP35243 200 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 KLK9Q2XQG4 91 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 TM4SF20Q53R12 229 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 ZNF414Q96IQ9 312 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
SHMT2-206ENST00000553529 MLXQ9UH92 298 aa13.75□□□□□ -0.21
SHMT2-206ENST00000553529 KLK9Q9UKQ9 250 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms