RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TRDCB7Z8K6 153 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 E7EUB6 86 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 FABP7O15540 132 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 DIRAS3O95661 229 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 CRYGCP07315 174 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 IL6RP08887 468 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-219ENST00000553488 CELP19835 753 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 MAP2K4P45985 399 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 SERPINB10P48595 397 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 TAS2R43P59537 309 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 BLOC1S1P78537 153 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 CBX3Q13185 183 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 IGSF11Q5DX21 431 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 PLAC9Q5JTB6 97 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 OR4A47Q6IF82 309 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 LINC00336Q6ZUF6 198 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 MMD2Q8IY49 270 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 GVQW1Q8N7I0 195 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 SETD9Q8NE22 299 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 OR4A4PQ8NGN8 299 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 PHYHIPQ92561 330 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 MARC2Q969Z3 335 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 TMEM80Q96HE8 168 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 ARHGAP5-AS1Q96IT6 56 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 GFI1Q99684 422 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 PECRQ9BY49 303 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 MAP6D1Q9H9H5 199 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 APLNQ9ULZ1 77 aa5.33□□□□□ -1.56
ATXN3-219ENST00000553488 IGLV11-55A0A075B6I3 123 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF320A2RRD8 509 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 EFCAB10A6NFE3 127 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 MFSD2BA6NFX1 497 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 TSPAN4O14817 238 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 BET1O15155 118 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 CREBL2O60519 120 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF735P0CB33 412 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 AREGP15514 252 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 RPL35AP18077 110 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 GALP22466 123 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 PSMB6P28072 239 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 TCTAP57738 103 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 RBMS2Q15434 407 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 RBM48Q5RL73 367 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 TTC23Q5W5X9 447 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 SLC25A42Q86VD7 318 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF575Q86XF7 245 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 OR6M1Q8NGM8 313 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 C2CD4CQ8TF44 421 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 TMEM190Q8WZ59 177 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 EEF1AKMT3Q96AZ1 226 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 ADTRPQ96IZ2 230 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 FYTTD1Q96QD9 318 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 CMSS1Q9BQ75 279 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 C9orf16Q9BUW7 83 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 MFFQ9GZY8 342 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 C5orf66Q9H5L9 145 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 MRPL27Q9P0M9 148 aaKnown RBP5.32□□□□□ -1.56
ATXN3-219ENST00000553488 KCNK7Q9Y2U2 307 aa5.32□□□□□ -1.56
ATXN3-219ENST00000553488 CGB1A6NKQ9 187 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 RTL8CO15255 209 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 CIB2O75838 187 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ACTL6BO94805 426 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 KBTBD11O94819 623 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 CDK1P06493 297 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 FCGR3AP08637 254 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 GSTT2P0CG29 244 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 GSTT2BP0CG30 244 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 RPL27AP46776 148 aaKnown RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ELLP55199 621 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 WNT4P56705 351 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ST3GAL4Q11206 333 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 TPBGQ13641 420 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 P2RY14Q15391 338 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF585BQ52M93 769 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 LAIR2Q6ISS4 152 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ZFP1Q6P2D0 407 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 H1FOOQ8IZA3 346 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 SLC38A6Q8IZM9 456 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 VKORC1L1Q8N0U8 176 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 PUSL1Q8N0Z8 303 aaKnown RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 OR10J5Q8NHC4 309 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 C11orf45Q8TAV5 145 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF502Q8TBZ5 544 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 GALNT14Q96FL9 552 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 URM1Q9BTM9 101 aaKnown RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 CENPOQ9BU64 300 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 ZNF436Q9C0F3 470 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-219ENST00000553488 SLC2A9Q9NRM0 540 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 FBXL17Q9UF56 701 aa5.31□□□□□ -1.56
ATXN3-219ENST00000553488 NACAE9PAV3 2078 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 IGKV1D-8A0A087WSZ0 117 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 TRBV7-1A0A0A6YYK4 115 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 IGHV3-35A0A0C4DH35 117 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 SLC17A2O00624 439 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 MYL12BO14950 172 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 FCGR3BO75015 233 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 IGLV2-14P01704 120 aa5.3□□□□□ -1.56
ATXN3-219ENST00000553488 CLEC3BP05452 202 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms