RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 FAAP20Q6NZ36 180 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 OR13C8Q8NGS7 320 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 DEDD2Q8WXF8 326 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 MS4A10Q96PG2 267 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 DUX3Q96PT4 197 aa14.3□□□□□ -0.12
CPSF2-202ENST00000553427 SRSF8Q9BRL6 282 aaKnown RBP14.3□□□□□ -0.12
CPSF2-202ENST00000553427 THAP7Q9BT49 309 aaPredicted RBP14.3□□□□□ -0.12
CPSF2-202ENST00000553427 MCRIP2Q9BUT9 160 aaKnown RBP14.3□□□□□ -0.12
CPSF2-202ENST00000553427 A0A1B0GW64 132 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 NPIPB5A8MRT5 1133 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 B3GALNT1O75752 331 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 OR8U8P0C7N1 319 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 RPA2P15927 270 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 PYDC2Q56P42 97 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 OXLD1Q5BKU9 147 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 SPANXN2Q5MJ10 180 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 THOC7Q6I9Y2 204 aaKnown RBP14.29□□□□□ -0.12
CPSF2-202ENST00000553427 Q8N402 240 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 CCDC71LQ8N9Z2 235 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 OR11H1Q8NG94 326 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 OR6Q1Q8NGQ2 317 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 OR1N2Q8NGR9 330 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 USMG5Q96IX5 58 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 ZNF355PQ9NSJ1 428 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 COA4Q9NYJ1 87 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 ZNF257Q9Y2Q1 563 aa14.29□□□□□ -0.12
CPSF2-202ENST00000553427 TRBV9A0A0B4J1U6 114 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 E7EUB6 86 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 IGLL1P15814 213 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 PI3P19957 117 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 AP3S2P59780 193 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 OR2B8PP59922 312 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 KLF9Q13886 244 aaPredicted RBP14.28□□□□□ -0.12
CPSF2-202ENST00000553427 KLK9Q2XQG4 91 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 C1QL4Q86Z23 238 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 MARCH1Q8TCQ1 289 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 COPZ2Q9P299 210 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 KLK9Q9UKQ9 250 aa14.28□□□□□ -0.12
CPSF2-202ENST00000553427 TRAV3A0A0B4J244 114 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 FAM223BA6NKX1 122 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 WIPF1O43516 503 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 KRASP01116 189 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 SERPINE2P07093 398 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 CRYGCP07315 174 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 APELAP0DMC3 54 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 DEFA6Q01524 100 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 FAM223AQ8IWN6 122 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 OR51S1Q8NGJ8 323 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 SEC22AQ96IW7 307 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 OR5B12Q96R08 314 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 TSC22D3Q99576 134 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 COMMD5Q9GZQ3 224 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 SCP2D1Q9UJQ7 156 aa14.27□□□□□ -0.13
CPSF2-202ENST00000553427 PRKDCP78527 4128 aaKnown RBP14.27□□□□□ -0.13
CPSF2-202ENST00000553427 C13orf42A0A1B0GVH6 325 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 HMX3A6NHT5 357 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 CGB1A6NKQ9 187 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 IGKV1-39P01597 117 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 IGKV1D-39P04432 117 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 FAUP35544 74 aaKnown RBP14.26□□□□□ -0.13
CPSF2-202ENST00000553427 G6PCP35575 357 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 FYTTD1Q96QD9 318 aaKnown RBP14.26□□□□□ -0.13
CPSF2-202ENST00000553427 QTRT1Q9BXR0 403 aaKnown RBP14.26□□□□□ -0.13
CPSF2-202ENST00000553427 SRRQ9GZT4 340 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 PRNDQ9UKY0 176 aa14.26□□□□□ -0.13
CPSF2-202ENST00000553427 C14orf166Q9Y224 244 aaKnown RBP14.26□□□□□ -0.13
CPSF2-202ENST00000553427 C3orf85A0A1B0GTC6 90 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 IGLC7A0M8Q6 106 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 LINC01619G3V211 115 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 SNAPC5O75971 98 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 IGHV3-11P01762 117 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 HSPB1P04792 205 aaKnown RBP14.25□□□□□ -0.13
CPSF2-202ENST00000553427 MYOD1P15172 320 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 CTRB1P17538 263 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 UCP1P25874 307 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 PSMB6P28072 239 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 ZNF45Q02386 682 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 CTRB2Q6GPI1 263 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 ZNF343Q6P1L6 599 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 HSD17B13Q7Z5P4 300 aaPredicted RBP14.25□□□□□ -0.13
CPSF2-202ENST00000553427 GDPD1Q8N9F7 314 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 NECAP1Q8NC96 275 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 OR1L8Q8NGR8 309 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 DPF1Q92782 380 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 SCGB3A2Q96PL1 93 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 TP53RKQ96S44 253 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 RTBDNQ9BSG5 229 aaPredicted RBP14.25□□□□□ -0.13
CPSF2-202ENST00000553427 ALX4Q9H161 411 aaPredicted RBP14.25□□□□□ -0.13
CPSF2-202ENST00000553427 C5orf66Q9H5L9 145 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 TMEM14BQ9NUH8 114 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 FKBP11Q9NYL4 201 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 GPR132Q9UNW8 380 aa14.25□□□□□ -0.13
CPSF2-202ENST00000553427 C15orf61A6NNL5 157 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 RBMXL2O75526 392 aaKnown RBP14.24□□□□□ -0.13
CPSF2-202ENST00000553427 ATG12O94817 140 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 DHFRP00374 187 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 AREGP15514 252 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 RAB25P57735 213 aa14.24□□□□□ -0.13
CPSF2-202ENST00000553427 RHOGP84095 191 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms