RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NDUFA11Q86Y39 141 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 MRPL41Q8IXM3 137 aaKnown RBP8.98□□□□□ -0.97
TMEM116-218ENST00000552839 FAM71E2Q8N5Q1 922 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 OR4F17Q8NGA8 305 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 ARPC1AQ92747 370 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 IL22RA2Q969J5 263 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 WWC2-AS2Q96NR7 200 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 OR4F4Q96R69 305 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 HINT2Q9BX68 163 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 BET1LQ9NYM9 111 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
TMEM116-218ENST00000552839 DUXBA0A1W2PPF3 345 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SRRM4A7MD48 611 aaKnown RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 AP4M1O00189 453 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SSNA1O43805 119 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 MAS1LP35410 378 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 OR2B8PP59922 312 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 BLCAPP62952 87 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM267Q0VDI3 215 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 DHRS2Q13268 280 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 TMEM187Q14656 261 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 FXYD3Q14802 87 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 ZNF585BQ52M93 769 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 FAM219AQ8IW50 185 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SLC35G3Q8N808 338 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 DUSP18Q8NEJ0 188 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 FYTTD1Q96QD9 318 aaKnown RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SPIN2AQ99865 258 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SPIN2BQ9BPZ2 258 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SEC22CQ9BRL7 303 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 GON7Q9BXV9 100 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 ZNF430Q9H8G1 570 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-218ENST00000552839 ZNF702PQ9H963 129 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 TPSG1Q9NRR2 321 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 SERTAD4Q9NUC0 356 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 FKBP11Q9NYL4 201 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 PRR13Q9NZ81 148 aa8.97□□□□□ -0.97
TMEM116-218ENST00000552839 A0A0B4J2A0 478 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 FAM25EA8MYX2 175 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 UPK2O00526 184 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 DUS4LO95620 317 aaKnown RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 CDS2O95674 445 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 HOXB5P09067 269 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 HLA-GP17693 338 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 CD33P20138 364 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 HOXA1P49639 335 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 POU2AF1Q16633 256 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 PRSS8Q16651 343 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 TMEM95Q3KNT9 176 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 DEFB121Q5J5C9 76 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 SELENOHQ8IZQ5 122 aaKnown RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 PUSL1Q8N0Z8 303 aaKnown RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 MINDY2Q8NBR6 621 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 OR52B4Q8NGK2 314 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 OR1S1Q8NH92 325 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 ZNF431Q8TF32 576 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 WIPF2Q8TF74 440 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 GLYATL2Q8WU03 294 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 ALX4Q9H161 411 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-218ENST00000552839 OR51J1Q9H342 316 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 PLSCR3Q9NRY6 295 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 SHPKQ9UHJ6 478 aa8.96□□□□□ -0.98
TMEM116-218ENST00000552839 COL7A1Q02388 2944 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 WI2-2373I1.2A0A1W2PRP0 233 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 ATP6V0E1O15342 81 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 IFNA17P01571 189 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 IL5P05113 134 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 FGF2P09038 288 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 BRWD1-AS2P59051 145 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 CX3CL1P78423 397 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 ANKRD55Q3KP44 614 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 KHDC1LQ5JSQ8 128 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 UNQ5815/PRO19632Q6UWF5 114 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 CENPVQ7Z7K6 275 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-218ENST00000552839 Q8N2B8 174 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 C12orf45Q8N5I9 185 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-218ENST00000552839 CHPT1Q8WUD6 406 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
TMEM116-218ENST00000552839 SEC22AQ96IW7 307 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 TMEM56Q96MV1 263 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 HSPB9Q9BQS6 159 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 ZNF355PQ9NSJ1 428 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 CACNG5Q9UF02 275 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 NSG2Q9Y328 171 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 TMED3Q9Y3Q3 217 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 OR51B2Q9Y5P1 312 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
TMEM116-218ENST00000552839 IGHV7-81A0A0B4J1V7 117 aa8.94□□□□□ -0.98
TMEM116-218ENST00000552839 C13orf42A0A1B0GVH6 325 aa8.94□□□□□ -0.98
TMEM116-218ENST00000552839 PSMB11A5LHX3 300 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms