RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LAGE3Q14657 143 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PTGES3Q15185 160 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 GRK1Q15835 563 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 Q1RN00 199 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PAN3Q58A45 887 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 KIAA2026Q5HYC2 2103 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 NXNL2Q5VZ03 156 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 KDM4DQ6B0I6 523 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PVRIGQ6DKI7 326 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 XAF1Q6GPH4 301 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 LAIR2Q6ISS4 152 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 UFSP1Q6NVU6 142 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF880Q6PDB4 577 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF322Q6U7Q0 402 aaPredicted RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 SLC35E3Q7Z769 313 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 TPRA1Q86W33 373 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 GID4Q8IVV7 300 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 DHRSXQ8N5I4 330 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF676Q8N7Q3 588 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 CHST4Q8NCG5 386 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PXT1Q8NFP0 134 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR4X2Q8NGF9 303 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR51A2Q8NGJ7 313 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR1N2Q8NGR9 330 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR6K6Q8NGW6 343 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR2G2Q8NGZ5 317 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 CANT1Q8WVQ1 401 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 TCTEX1D2Q8WW35 142 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ASB17Q8WXJ9 295 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ARPC1AQ92747 370 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PELI1Q96FA3 418 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 KCTD14Q9BQ13 255 aaPredicted RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 GPR61Q9BZJ8 451 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 WFDC10AQ9H1F0 79 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR51V1Q9H2C8 321 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IFI27L2Q9H2X8 130 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR51J1Q9H342 316 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 EFCAB1Q9HAE3 211 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 RHOFQ9HBH0 211 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 PAK1IP1Q9NWT1 392 aaPredicted RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 CLN6Q9NWW5 311 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 CALYQ9NYX4 217 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 IL36GQ9NZH8 169 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 KIF25Q9UIL4 384 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ENPP5Q9UJA9 477 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF221Q9UK13 617 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 OR52A1Q9UKL2 312 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 POLR1DQ9Y2S0 133 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 POLDIP2Q9Y2S7 368 aa1.68□□□□□ -2.14
CPSF6-207ENST00000551516 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
CPSF6-207ENST00000551516 AGRNO00468 2067 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 IGKV3D-20A0A0C4DH25 116 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 IGKV1-6A0A0C4DH72 117 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 LOC107986453A0A1B0GWG9 222 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 A0A1W2PPE3 182 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 C12orf77C9JDV5 145 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 E7EUB6 86 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 GABRPO00591 440 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OVOL1O14753 267 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 HSD17B6O14756 317 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 RS1O15537 224 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 BCL2L11O43521 198 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ORC5O43913 435 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 DEDDO75618 318 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CCNB2O95067 398 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 NAPSAO96009 420 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 MOSP00540 346 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 LALBAP00709 142 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 IGKV1-16P04430 117 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 LGALS1P09382 135 aaKnown RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CD7P09564 240 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OR8U8P0C7N1 319 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 C8orf88P0DMB2 117 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CT45A6P0DMU7 189 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CT45A5P0DMU8 189 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CT45A7P0DMV0 189 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 RCC1P18754 421 aaPredicted RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 BRS3P32247 399 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 KIR2DS2P43631 304 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 P2RY1P47900 373 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 NUDT2P50583 147 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 RAB7AP51149 207 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CRISP1P54107 249 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 EDDM3BP56851 147 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CXCR4P61073 352 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CXCL6P80162 114 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF45Q02386 682 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 TNFRSF9Q07011 255 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 MADCAM1Q13477 382 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 EIF4EBP1Q13541 118 aaPredicted RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 APOFQ13790 326 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 SNCBQ16143 134 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 C5orf64Q2M2E5 130 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 DEFB114Q30KQ6 69 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 PIGYQ3MUY2 71 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 TIGITQ495A1 244 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 MORN2Q502X0 79 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 AKIRIN2Q53H80 203 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 SAMD4BQ5PRF9 694 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms